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Direction I:Functional genomics of model organisms, transgenic technology and safety assessment

 

The main papers published in Direction I

 

 

No.

Title

Author(rank)

Publication time

Publisher, name of conference, ISSN

1

Display of Bombyx mori alcohol dehydrogenases on the Bacillus subtilis spore surface to enhance enzymatic activity under adverse conditions.

Chen Keping(2T/5)

2011

PLoS One. ISSN:1932-6203

2

Protein profile of Bacillus subtilis spore

Chen Keping(2T/5)

2011

Curr Microbiol. ISSN: 0343-8651

3

Cloning, expression and characterization of alcohol dehydrogenases in the silkworm Bombyx mori.

Chen Keping(2T/7)

2011

Genet Mol Biol. ISSN 1415-4757

4

Characterization of a late gene, ORF67 from Bombyx mori nucleopolyhedrovirus.

Chen Keping(2T/7)

200711

FBES Letters(SCI:3.26) ISSN: 0014-5793

5

Molecular cloning of Bombyx mori cytochrome P450 gene and its involvement in fluoride resistance.

Chen Keping(2T/5)

200803

Journal of Hazardous Materials(SCI:2.98) ISSN: 0304-3894

6

The nanos gene of Bombyx mori and its expression patterns in developmental embryos and larvae tissues.

Chen Keping(2T/9)

200804

Gene Expression Patterns.(SCI:2.11) ISSN: 1567-133X

7

Identification and characterization of a novel 1-Cys peroxiredoxin from silkworm, Bombyx mori.

Chen Keping(2T/7)

200801

Comparative Biochemistry and Physiology Part B:Biochemistry and Molecular Biology,(SCI:1.53)

8

Phylogenetic analysis of Nosema antheraeae (Microsporidia) isolated from Chinese oak silkworm, Antheraea pernyi.

Chen Keping(2T/6)

200605

Journal of Eukaryotic Microbiology(SCI:1.50 ) ISSN 1066-5234

9

The effect of calorie restriction on growth and development in silkworm, Bombyx mori.

Chen Keping(2T/8)

200907

Arch Insect Biochem Physiol.

10

Cloning and partial characterization of a gene in Bomybx mori homologous to a human adiponection receptor

Chen Keping(2T/7)

200806

Acta Biochimica Polonica vol55.No.2,241-249,(SCI:1.36)ISSN: 0001-527X

11

Cloning and characterization of nanos gene in silkworm Bombyx mori

Chen Keping(2T/4)

200801

JOURNAL of GENETICS and GENOMICS 35(2008)77-83 SCI IF 0.83 ,ISSN1673-8527

12

A New Time-saving Transformation System for Brassica napus

Xiaoli Tan(3T/7)

200906

African Journal of Biotechnology, 2009, 8 (11):2497-2502 IF 0.47 ISSN: 1684-5315

13

Quantitively determination the strength of rapeseed pod dehiscence

Xiaoli Tan (1/7)

200911

Transaction of CSAE, 2006,22(11):40-43. EI ISSN: 1002-6819

 

 

List of the major undertaken research projects in Direction I

 

 

No.

Project titles(number)

Source

Undertaken time

Undertaker(rank)

Funds(Ten thousand yuan)

1

Technology Major Projects for Cultivation of New Varieties of National Genetically Modified Organism. Title of affiliated program: the technology of the environmental safety assessment for the Improved qualitative transgenic rice. 2008ZX08011-001

National major transgenic projects (Ministry of Agriculture)

200807-201012

Chen Keping(1)

100

2

Technology Major Projects for Cultivation of New Varieties of National Genetically Modified Organism:High-throughput two-dimensional electrophoresis-mass spectrometry to detect genetically modified rice products. 2009ZX08012-018B

National major transgenic projects (Ministry of Agriculture)

200906-201012

Chen Keping(1)

300

3

Research of functional genomics and molecular improvement for  the major economic traits of silkworm in the 6th issue, Study of silkworm small molecule mRNA, small peptide function and mechanism of interaction between pathogen and host, participating units(Jiangsu University)(2005CB121000-06)

National Key Basic Research Program(973 Program)

200501-201012

Chen Keping(1)

60

4

The molecular mechanism of oil forming and regulation in Brassica napus(2006CB101600)

National Key Basic Research Program(973 Program)

200601-201012

Xiaoli Tan (1)(Affiliated program)

30

5

Study on  Mechanism of NPV resistance to Silkworm

National Natural Science Foundation of China

200401-200612

Chen Keping(1)

21

6

Establishment of the genetic transformation system for oil producing algae and promoting the oil contents and growth rate of algae by genetic modification. 2009CB724700

National Key Basic Research Program(973 Program),affiliated project

200901-201312

Xiaoli Tan (1)

10

7

The study on the transgenic rapeseed for high oil contents and optimal fatty acids compositions. 2008AA10Z152affiliated Program

National High Technology Research and Development Program

200801-201112

Xiaoli Tan (1)

10

8

Study of BnNPV resistance genes in silkworm and their  functional mechanisms

333 projects in Jiangsu Province

200501-200612

Chen Keping(1)

6

9

Relationship between silkworm virus BmNPV and its host

Six major talent peak funded projects

200601-200812

Chen Keping(1)

5

 

 

Direction II:Interaction of plant and microbe and its molecular regulation

 

The main papers published in Direction II

 

 

No.

Title

Author(rank)

Publication time

Publisher, name of conference, ISSN

1

Quorum- sensing signaling is required for production of the antibiotic pyrrolnitrin in a rhizospheric biocontrol strain of Serratia plymuthica

Liu Xiaoguang(1/8)

200702

FEMS Microbiol Lett. 270: 299–305. (SCI, IF=2)ISSN (printed): 0378-1097.ISSN (electronic): 1574-6968.

2

Induction of systemic resistance, root colonisation and biocontrol activities of the rhizospheric strain of Serratia plymuthica are dependent on N-acyl homoserine lactones

Liu Xiaoguang(2T/6)

200901

Eur J Plant Pathol. 124(2): 261-268 (SCI, IF=1.5)ISSN: 0929-1873ISSN (electronic): 1573-8469.

3

 Characterisation of two quorum sensing systems in the endophytic Serratia plymuthica strain G3: differential control of motility and biofilm formation according to life-style

 

Liu Xiaoguang(1T/8)

201102

BMC Microbiol. 11(1):26(IF=2.96)

4

Biocontrol potential of an endophytic Serratia sp. G3 and its modes of action

Liu Xiaoguang(1T/7)

2010

World J Microbiol Biotech 26:1465–1471. (IF=1.214)

5

Genome-wide identification and evolutionary analysis of Arabidopsis Sm genes family

 

Cao Jun(1T/6)

2010

J Biomol Struct& Dyn. 2010, 28:535-544(IF=4.98)

6

Phylogenetic analysis and evolution of aromatic amino acid hydroxylase

Cao Jun(1T/5)

2011

FEBS Lett.2011,584:4775-4782 (IF=3.6)

7

Mycoparasitism of endophytic fungi isolated from reed on soilborne phytopathogenic fungi and production of cell wall-degrading enzymes in vitro

Liu Xiaoguang(2/8)

2009

Curr Microbiol. 2009, 59: 584-592 (IF=1.3)

8

Involvement of the global regulators GrrS, RpoS, and SplIR in formation of biofilms in Serratia plymuthica

Liu Xiaoguang(3/7)

2010

Russ J Genet.2010,46:541-545 (IF=0.431)

9

Role of the Hfq in Serratia plymuthica

Liu Xiaoguang (8T/8)

2011

Frontiers in Bioscience (in press, IF=4)

10

Mycoparasitism of Rhizoctonia solani by Endophytic Chaetomium spirale ND35 : Ultrastructure and Cytochemistry of the Interaction

Liu Xiaoguang (2T/4)

200505

J. Phytopath. 2005.153: 280-290 (IF=0.9)

 

 

List of the major undertaken research projects in Direction II

 

 

No.

Project titles(number)

Source

Undertaken time

Undertaker(rank)

Funds(Ten thousand yuan)

1

Set up the transgenic rapeseed of DA1-R358K and the study on the mechanism of the seed size enlargement.2010-PCCE-KF-03

State Key Laboratory of Plant Cell and Chromosome Engineering.

201006-201205

Xiaoli Tan (1)

10

2

Melecular Basis on Sclerotinia Resistance of Oilseed Rape Mediated by JA Signaling Pathway (10KJB210001)

Universities Natural Science Research Program from Education Department of Jiangsu Province

201009-201212

Wang Zheng(1)

3

3

A Specific Signaling Response Mechanism for the Resistance to S. sclerotiorum In oilseed Rape Mediated by BnMPK4.(31071672/C140106)

National Natural Science Foundation of China

2011.01-2013.12

Wang Zheng(1)

32

4

Identification and signal transduction of Rsm A protein regulated sRNA/mRNA in plant symbiotic bacteria Serratia plymuthica G3.(10JDG027)

Jiangsu University

2010.01-2013.01

Cao Jun(1)

5

5

Identification and its effect on gene expression of tandem repeat sequence in Arabidopsis promoter(31100923/C0606)

National Natural Science Foundation of China

2012.01-2014.12

Cao Jun(1)

26

6

Quorum sensing regulation of the biocontrol-related traits in plant-associated bacteria (30370954)

National Natural Science Foundation of China

200701-200912

Liu Xiaoguang(1)

25

7

Characterisation of the quorum sensing signaling systems in Serratia plymuthica

National Natural Science Foundation of China-the England Royal Society - Co-sponsored program

200801-200912

Liu Xiaoguang(1)

8.5

8

Characterisation of the second AHL-mediated QS system in Serratia plymuthica (30670030)

National Natural Science Foundation of China

200701-200912

Liu Xiaoguang(1)

23

9

Quorum sensing  regulation of  the  interactions of Serratia plymuthica and host plants (07JDG030)

Senior Talent

Funds of Jiangsu University

200712-201012

Liu Xiaoguang(1)

12

 

 

Direction  III:Animal and human molecular virology

 

The main papers published in Direction III

 

 

No.

Title

Author(rank)

Publication time

Publisher, name of conference, ISSN

1

The key role for local base order in the generation of multiple forms of China HIV-1 B'/C intersubtype recombinants

Zhang Chiyu(1/3)

200501

BMC Evol Biol(SCI:4.05) ISSN 1471-2148

2

Adaptive Evolution of the Spike Gene of SARS Coronavirus: Changes in Positively Selected Sites at Different Epidemic groups

Zhang Chiyu(1/3)

200601

BMC Microbiol(SCI:2.88) ISSN: 1471-2180

3

Rapid increasing prevalence of HIV and syphilis and HIV-1 subtype characterization Among men who have sex with men in Jiangsu, China.

Zhang Chiyu(6T/6)

200902

Sex Transm Dis(SCI:2.86) ISSN: 0148-5717

4

Different sliding window sizes and inappropriate subtype references result in discordant mosaic maps and breakpoint locations of HIV-1 CRFs

Zhang Chiyu(1T/3)

200809

Infect Genet Evol(SCI:2.79) ISSN: 1567-1348.

5

Near Full-Length Genome Characterization of an HIV-1 CRF01_AE Strain in Jiangsu,China:Evidence of Two Independent Introductions from Fujian

Zhang Chiyu(9T/9)

200906

AIDS Res Hum Retroviruses(SCI:2.02) ISSN: 0889-2229

6

Characterization of Bombyx mori parvo-like virus non-structural protein NS1

Li Guohui(1/9)

200901

Virus Genes(SCI:1.38) ISSN 0920-8569

7

Characterization of the genome structure of Bombyx mori densovirus (China isolate)

Yao Qin(2/6)

200601

Virus Genes(SCI:1.38) ISSN 0920-8569

8

Expression of Non-structural Protein NS3 Gene of Bombyx mori densovirus (China isolate)

Yao Qin(2T/7)

200804

Journal of Genetics and Genomics(SCI: 0.36) ISSN 1673-8527

9

the expression of non-structural protein 1 (NS1) from silkworm densovirus-Chinese strain

Yao Qin(2T/6)

200802

Journal of Microbiology. ISSN: 0001-6209

10

Cloning and Characterization of Ribosome-associated Membrane Protein 4 (RAMP4) gene in silkworm Bombyx mori

Yao Qin(1/4)

200502

International Journal of Industrial Entomology ISSN:1598-3579

 

 

List of the major undertaken research projects in Direction III

 

 

 

No.

Project titles(number)

Source

Undertaken time

Undertaker(rank)

Funds(Ten thousand yuan)

1

Functional analysis of DNA polymerase from Bombyx mori parvo-like virus. 31000080/C010802

National Natural Science Foundation of China

2011.01-2013.12

Li Guohui(1)

20

2

The effects of Bombyx mori β-N-acetylglucosaminidase 2 on the glycosylation of nucleopolyhedrovirus proteins

31101673/C040504

National Natural Science Foundation of China

2012.01-2014.12

Liu xiaoyong(1)

24

3

Diversity of GTPases and their roles in innate immunity of Macrobrachium rosenbergii.31101926/C190601

National Natural Science Foundation of China

2012.01-2014.12

Ren Qian(1)

23

4

Investigation on the mechanism of MVB pathway in Bombyx mori and its role in the budding process of BmNPV.

10KJB180001

Universities Natural Science Research Program from Education Department of Jiangsu Province

201009-201212

Xia Hengchuan(1)

3

5

Divercity of defensins of Hyriopsis cumingii and its roles in anti-HIV

Jiangsu university research start-up fund senior professionals

2010-2012

Ren Qian(1)

5

6

Divercity of defensins of Hyriopsis cumingii and its roles in anti-HIV MR&NPC2010001

Open Project of Key Laboratory of Ministry for Medical Resources and Natural Pharmaceutical Chmistry

2010-2011

Ren Qian(1)

2

7

Gene polymer molecular breeding of Bombyx mori with high-yield and disease resistance to two viruses. (2008AA10Z145)

National High Technology Research and Development Program -863 Program

200801-201011

Yao Qin(1)

50

8

The mechanism of HIV-1 recombination: analyses on the co/super-infection potential of different HIV-1 subtypes

81071391/H1908

National Natural Science Foundation of China

2011.01-2013.12

Zhang Chiyu(1)

32

9

The mechanism of HIV recombination and variants and its association with AIDS disease progression

(30600352)

National Natural Science Foundation of China

200701-200912

Zhang Chiyu(1)

21

10

Breeding and application of Bombyx mori with high-yield and disease resistance to two viruses. BE2008379

Jiangsu Science and Technology Support Program-Agricultural sector

200806-201106

Yao Qin(2)

30

11

Adaptive evolution of HIV-1 env and cellular tropism change during HAART

Natural Science Foundation of Jiangsu Province

200901-201112

Zhang Chiyu(1)[cooperation]

8

12

HIV recombination and its association with AIDS disease progression (BK2006550)

Natural Science Foundation of Jiangsu Province

200607-200812

Zhang Chiyu(1)

5

13

Adaptive evolution of HIV-1 with different cellular tropism

Open Project of State Key Laboratory of Virology,Wuhan Institute of Virology,CAS

200901-201012

Zhang Chiyu(1)

3

14

The “Top-notch personnel” Project of Jiangsu University

Top-notch talents in Jiangsu University

200804-201212

Zhang Chiyu(1)

30

 

 

Direction  IV:Insect bio-reactor and tumor-related gene expression and function studies

 

The main papers published in Direction IV

 

 

 

No.

Title

Author(rank)

Publication time

Publisher, name of conference, ISSN

1

Genomic sequence, organization and characteristics of a new nucleopolyhedrovirus isolated from Clanis bilineata larva.

Wang wenbing(8T/8 )

200902

BMC Genomics  IF  3.99 ISSN 1471-2164

2

A novel way to purify recombinant baculoviruses by using bacmid.

Wang wenbing(6T/6)

200901

Bioscience report    IF 3.01 ISSN 0144-8463

3

Identification of a single-nucleocapsid baculovirus isolated from Clanis bilineata tsingtauica (Lepidoptera: Sphingidae)

Wang wenbing(7T/7)

200805

 Arch Virol  IF 2.11 ISSN 0304-8608

4

The Transgenic BmN Cells with Polyhedrin Gene: A Potential Way to Improve the Recombinant Baculovirus Infection Per Os to Insect Larvae.

Wang wenbing(6T/6)

200809

Appl Biochem Biotechnol  IF 1.6 ISSN 0273-2289

5

Cloning and sequence analysis of the Antheraea pernyi nucleolyhedrovirus gp64 gene.

Yu Feng(4/5)

200512

Journal of Biosciences   IF 1.1 ISSN: 0250-5991 (print version).: ISSN: 0973-7138 (electronic version).

6

Analysis of oral infection and helicase gene of the nucleopolyhedroviruses isolated from Philosamia cynthia ricini and Antheraea pernyi.

Wu Yan(5/6)

200801

Biocontrol Science & Technolog IF 0.9 ISSN  1360-0478

7

Alterations of lymphoid enhancer factor-1 isoform expression in solid tumors and acute leukemias.

Wang wenbing(1/10)

200501

Acta Biochim Biophys Sin IF 0.5;ISSN 1672-9145

8

Expression of Bombyx mori nucleopolyhedrovirus ORF76 in permissive and non-permissive cell lines by a novel Bac-to-Bac/BmNPV baculovirus expression system.

Wang wenbing(7T/7)

200809

Polish journal of microbiology SCI-E IF 0.9;ISSN: 1733-1331

9

Expression of EGFP driven by BmNPV orf4 promoter, a novel immediate early promoter.

Wang wenbing(7T/7)

200906

Biologia   IF 0.3  ISSN: 0006-3088

10

Role of IAP gene of Bombyx mori in the process of baculovirus infection

Wu Huiling(1/5)

200709

6th China International Silk Conference/2nd International Textile Forum 2007 SEP 13-14, ISTP,ISBN978-7-122-01157-2

 

 

List of the major undertaken research projects in Direction IV

 

 

,

 

No.

Project titles(number)

Source

Undertaken time

Undertaker(rank)

Funds(Ten thousand yuan)

1

Construction of a new scaffold materials of silk fibroin tissue-engineering tendon(BE2010705)

 

The Jiangsu Province Science and Technology Support Program

2010,10-2013,9

Huang Guoping(1)

12

2

Preparation and preliminary identification of functional components for the treatment of type 2 diabetic mellitus in silk fibroin hydrolysates 20090, 451175,

China Postdoctoral Science Foundation

200906-201106

Huang Guoping(1)

3

 

 

Direction  V:DNA damage and repair mechanisms

 

The main papers published in Direction V

 

 

No.

Title

Author(rank)

Publication time

Publisher, name of conference, ISSN

1

Characterization of ATPase activity of class II chaperonin from the hyperthermophilic archaeon Pyrococcus furiosus

Chen Huayou(1T/6)

200911

BIOTECHNOLOGY LETTERS(2009):31:1753-1758,SCI(IF 1.595)

2

Simple and efficient methods for isolation and activity measurement of the recombinant hirudin variant 3 from the Bacillus subtilis.

Chen Huayou(1/6)

2011,

African Journal of Biotechnology. 10(44):8889-8894.

3

Molecular cloning, expression and characterization of Bmserpin-2 gene from Bombyx mori.

Xia Hengchuan(2/9)

200912

Acta biochimica Polonica SCI IF(2007)1.261.ISSN: 0001-527X

4

Characterization and Localization of the Vacuolar-Type ATPase in the Midgut Cells of Silkworm (Bombyx mori)

Chen Huiqing(2/8)

200906

Z.Naturforsch.64c,899-905(2009),SCI IF(2007)0.82. ISSN:0932-0784

5

Bmpkci is highly expressed in resistant silkworm strain: implication of its role in resistance to BmDNV-Z.

Chen Huiqing(2/6)

200701

European Journal of Entomology.104:369-376,2007,SCI  IF(2006) 0.782. ISSN:1210-5759

6

Characterization of ORF127 of Helicoverpa armigera nucleopolyhedrovirus

Guo Zhongjian(1T/4)

200912

ACTA VIROLOGICA SCI (IF=0.788)  ISSN: 0001-723X

 

Isolation and characterization of a PUF-domain pumilio gene from silkworm Bombyx mori African Journal of Biotechnology.

Chen Huiqing(4/6)

200903

African Journal of Biotechnology Vol.8(6),pp.986-994,2009,SCI IF(2007)0.456. ISSN:1684-5315

 

 

List of the major undertaken research projects in Direction V

 

 

 

No.

Project titles(number)

Source

Undertaken time

Undertaker(rank)

Funds(Ten thousand yuan)

1

Investigation on the structure and function of key proteins involved in the periplasmic biosynthesis of pyoverdine, an essential siderophore of Pseudomonas aeruginosa.

National Natural Science Foundation of China

201201-201512

Xia Hengchuan(2)

50

 

Functional analysis of p12,the 4th subunit of human DNA.

09JDG002

Jiangsu University

2010.01-2012.12

Zhou Yajing(1)

10

2

Functional analysis of DNA polymerase delta. 30970612

National Natural Science Foundation of China

200912-201212

Zhou Yajing(1)

30

3

Research of metabolic engineering of the thermophilic anaerobic bacteria and the cellulose(2009CB724700)

Sub-project of National Key Basic Research Program of China (973 Program)

200909-201312

Chen Huayou(1)

10

4

The posttranslational modification analysis of human polymerase delta(10JDG075)

Jiangsu University

2010.01-2013.12

Mai Weijun(1)

5

5

The differences study of immune rseponse in head kidney andperipheral blood of red-spotted grouper induced by Vibrio alginolyticus. (31001132/C190601)

National Science Foundation for Young Scientists of China

2011.01-2013.12

Mai Weijun(1)

18

6

Biochemical analysis of Bombyx mori baculovirus DNA polymerase(09JDG006).

Jiangsu University

2010.01-2012.12

Chen Huiqing(1)

5

7

Functional studies for replication of Bombyx mori baculovirus DNA polymerase.31100118/C010802

National Natural Science Foundation of China

2012.01-2014.12

Chen Huiqing(1)

22

8

Biochemical analysis of Bombyx mori baculovirus DNA polymerase(09KJB180001)

Universities Natural Science Research Program from Education Department of Jiangsu Province

2010.01-2012.12

Chen Huiqing(1)

3

10

The mechanism of MVB pathway in Bombyx mori and its role in the budding process of BmNPV.09JDG005

Jiangsu University

200901-201112

Xia Hengchuan(1)

5

 

Direction  VI:Molecular Nutrition,  metabolism and function of trace elements, enzymes

 

The main papers published in Direction VI

 

 

 

No.

Title

Author(rank)

Publication time

Publisher, name of conference, ISSN

1

Saturation-mutagenesis in two positions distant from active site of a Klebsiella pneumoniae glycerol dehydratase identifies some highly active mutants.

Xianghui Qi(1/9)

200901

Journal of BiotechnologyIF=2.687,ISSN: 0168-1656

2

Proteomics analysis of liver samples from puffer fish Takifugu rubripes exposed to excessive fluoride: An insight into molecular response to fluorosis

Lu Jian(1/6)

200906

Journal of Biochemical and Molecular Toxicology,(SCI IF1.75)ISSN: 1095-6670

3

Protein profiling analysis of skeletal muscle of a pufferfish, Takifugu?rubripes.

Lu Jian(1/6)

200907

Molecular biology report,(SCI IF 1.75)ISSN:(printed): 0301-4851 (electronic): 1573-4978

4

Determination of protein composition and host-derived proteins of Bombyx mori nucleopolyhedrovirus by two-dimensional electrophoresis and mass spectrometry

Liu xiaoyong(1/4)

200807

Intervirology. IF(2007)1.448 ISSN 0300-5526

5

Protein Profile of Nomuraea rileyi Spore Isolated from Infected Silkworm.

Liu xiaoyong(2/7)

200903

Current Microbiology. SCI收录 IF(2007)1.167. ISSN: 0343-8651

6

Comparative proteomics analysis of cardiac muscle samples from pufferfish Takifugu rubripes exposed to excessive fluoride: initial molecular response to fluorosis.

Lu Jian(1/6)

200907

Toxicology Mechanisms and Methods,(SCI IF 0.46)ISSN 1537-6524

7

Proteome analysis of silkworm ( Bombyx mori ) midgut proteins related to

BmNPV infection resistance or susceptibility

Liu xiaoyong(1/5)

200804

Acta Entomologica Sinica 2008,51(4):443-448ISSN :0454-6296

8

Diversifying Evolution of Endo- beta- 1,4- glucanase in Termites (Isoptera)

Xu qinggang (1/9)

201011

Sociobiology  IF(2009): 0.502

ISSN :0361-6525

 

 

 

List of the major undertaken research projects in Direction VI

 

 

No.

Project titles(number)

Source

Undertaken time

Undertaker(rank)

Funds(Ten thousand yuan)

1

Screening and directional selection for strains of high-hydrolytic micro-organisms(10JDG098)

Jiangsu University

2010.06-2012.06

Xu Qinggang(1)

3