Ⅰ. General introduction of the biology discipline and the research fields
The Institute of Life Sciences was founded in March,2001. It is chaired by Shengli Yang, a renowned academician of Chinese Academy of Sciences. Although it is a new research institute in Jiangsu university, it matured quickly into an active organization with diversified research fields, including functional genomics of model organisms, transgenic technology and safety assessment, interaction of plant and microbe and its molecular regulation, animal and human molecular virology, insect bioreactor, tumor-related genes,molecular nutrition, molecular metabolism, molecular biology of enzymes,DNA damage and repair mechanisms.
The institute currently have over 40 faculties,including Dr.Keping Chen, the Dean of Institute of Life Sciences. Dr. Chen is an internationally recognized expert in the field of silkworm and virus, and is also the winner of the second award for National Science and Technology, the first and third award for Agriculture Science and Technology. Led by Dr.Chen, many research groups have been established and various studies are conducted in an independent and collaborative fashion. More than 200 papers have been published, and at least 100 publications are in SCI Journals. The ongoing studies are supported by National Science Foundation of China, Ministry of Science and Technique of China, the National Key Technologies Research and Development Program of China National Venture Foundation Development Programs, National 863 and 973 programs, the National key program of Transgenic , ministry of finance Program of China, Jiangsu High-tech Program of Jiangsu Ministry of Education. Program , Foundation of Jiangsu Talent Program and lateral research projects.
The institute has also established an excellent research platform, invested with more than 10 million RMB from central and local goverments. The institute owns Genetic Analysis system, mRNA fluorescent differential display system, Ultracentrifuge, PCR Amplifier, Nucleic acid/protein Analyzer, Cell electroporation apparatus, Hybridization Oven, Gel Documentation System, ultraflex TOF-TOF MS.
The Master Degree Program in Biology focuses on:
1.Functional genomics and proteomics of model organisms
2.Cell metabolism and molecular biology of nutrition
3.Viruses and applied microbiology
4.Cellular signal transduction and DNA damage and repair
Ⅱ. Goal & objectives
Goal of the major is to provide students with the high quality of training in diverse areas of molecular biology research that focus on the understanding of biological knowledge and facts as well as use the modern biological techniques to do biological research.
In order to achieve the goal of this major, requirements for graduate students to complete the corresponding courses within the scheduled time, also includes:
A. With correct outlook on life and values, good moral character, strict style of study, strong sense of enterprise and pioneering spirit.
B. With firm grasp of the basis theory of Biology, professional knowledge and experimental skills, professional development and frontiers; being competent of reading and writing scientific papers(In Chinese or English); with the ability to carry out scientific research work, being competent in the specialized field of teaching and research, with new insights in scientific or specialized theory or technique.
C. With physical and mental health.
D. With rigorous scientific attitude, good team spirit, strong communication ability and lifelong learning ability.
E. With strong creativity in this discipline field.
Ⅲ. Study duration and teaching methods
The master program at Institute of Life Sciences usually is a 3 year program. A master degree student can not graduate in less than 2 years or more than 4 years. The student participated in this program should finish 18 credit courses during the 1styear, including at least 14 credits from degree courses and 4 or more credits from elective courses. Most courses are lectured in fall semester. In the remaining 2-2.5 years, the student should focus on the project research and publish a paper in a peer reviewed journal. After pass oral defense of the degree dissertation, the master degree will be awarded. Institute of Life Sciences focus on developing the student’s ability to initiate and carry out original research projects. The research programs in the institute covers the major fields of biology.
Ⅵ. Curriculum
Course Category | Course name | Credits | Term | School by which Courses opened | Type of the Courses | Remark |
Degree Courses | Public Degree Courses | Overview of China | 3 | 1 | Overseas Education College |
| Compulsory |
ChineseⅠ | 2 | 1 | Language & Culture Center |
|
ChineseⅡ | 2 | 2 | Language & Culture Center |
|
Fundamental &Theoretical Courses | Biochemistry | 2 | 1 | Institute of life sciences | English | At least 4 credits |
Molecular Biology | 2 | 1 | Institute of life sciences | English |
Molecular Oncology | 2 | 1 | Institute of life sciences | English |
Bio -informatics | 2 | 1 | Institute of life sciences | English |
Core Specialized Degree Courses | Instrumental Analysis and experimental technology in biology | 3 | 1 | Institute of life sciences | Experimental platform | At least one course |
Non -degree courses | Special Elective Courses | Molecular Genetics | 2 | 1 | Institute of life sciences | English | Selective |
Functional Genomics | 2 | 1 | Institute of life sciences | English |
Molecular Virology | 2 | 1 | Institute of life sciences | English |
Progress in life science | 2 | 1 | Institute of life sciences | English |
Global Regulatory Network and Signal Transduction in Bacteria | 2 | 1 | Institute of life sciences | English |
Cell Signal Transduction | 2 | 1 | Institute of life sciences | English |
Plant Molecular Biology | 2 | 1 | Institute of life sciences | English |
Cell Biology | 2 | 1 | Institute of life sciences | English |
Genetic engineering | 2 | 1 | Institute of life sciences | English |
Scientific writing in English | 2 | 1 | Institute of life sciences | English |
Public Elective Courses | All courses in all discipline | Selective |
Ⅴ. Credit requirement for practice
Biology is an experimental discipline, so students are required to do scientific experiments and learn from project research.The post-graduate students are also required to attend related seminars and experts forum, and if possible, to participate in social investigation and research or technology promotion.
1. Academic activity and seminar (³8 credits)
A postgraduate student for master degree in biology should take part in academic activity or seminar for more than 10 time, 0.5 credit each time, total 5 credit. Participation in society polling activity or technology & science promotion activity (2 credits). Post presentation or oral presentation in domestic or international conference once 1 credit. Regularly participate in lab meeting to discuss research projects weekly or bi-weekly (5 credits).
2. Reading scientific research papers and reviews (³2 credits)
A postgraduate student should read and present one or two English academic papers related to his research project every semester. And student is recommended to read more than one academic paper weekly.
3. Other practice activity (1 credit)
For those students need to do lab experiments for their research projects, the lab experiments are deemed as important practice activity. If ones research project involves no lab experiment, teaching assist or research assist to the supervisor is practice activity. A student should has at least a month experience of practice activity.
Ⅵ. Advisor committee and supervisor
The prospect postgraduate student should contact a principle investigator (PI) in this institute or a mentor in the biological mater degree program during the admission application process. An Advisory Committee initially consists of at least 3 members of the Graduate Faculty, including the Major Advisor, who acts as the chair. At least 2 members must be from Institute of Life Sciences, with at least 1 of these being a full member of the Faculty. The remaining 2 members may be from Institute of Life Sciences or another college, with 1 being a full member of the Graduate Faculty. The committee should be established by the end of the second semester of the student’s graduate career.
Ⅷ. Degree dissertation
Graduate students are required to present the research proposal in the 1stacademic year. Once the research proposal, which is held by the institute, is agreed by the advisor committee or supervisor, the student can report the research progress in the 2edacademic year and submit the degree dissertation 6 months later. The content of dissertation should cover his research proposal, his research project and his relevant publications in a format similar previous degree dissertation including background, methods, results, discussion and references. The details can be find in the document ‘The instruction of publication requirement for a postgraduate student to apply for degree certificate at Jiangsu University”.
VIII. Practice process and requirement
A post-graduate student should carry on original research projects to complete the degree dissertation. (The details for practice process and requirement see article V)
IX. Other issues and requirements
Graduate students are required to initiate their thesis study projects prior to the end of the second semester. The medium-term examination for thesis study is scheduled in the fourth semester. Other following important schedules relevant to your graduate study could be found from the Overseas Education College (OEC) at Jiangsu University. In general, a Master’s student is required to have a research proposal and a plan of study accepted by his or her Graduate Advisory Committee by the end of the second semester of study. A list of completed courses and those proposed to meet school requirements should also be prepared. A meeting of the Advisory Committee should be convened by the student to discuss his/her proposal and course work.
Every graduate student is required to publish at least one research paper in a recognized academic journal prior to being eligible to apply for dissertation defense. The thesis must demonstrate skill of research techniques, ability to perform original and independent research, and skill in concluding and discussion. Jiangsu University should the first institute of the aforementioned publication. Details can be found in “The principle instruction of post-graduate programs at Jiangsu university”.
X. Financial assistance
Applicants from a foreign country can apply a variety of Chinese government scholarship that may fully or partially support your degree study at JU. For further information regarding these scholarships provided by Chinese government, you can surf on the website of Overseas Education College (OEC), JU, athttp://oec.ujs.edu.cn/pub/eng/Scholarship/GS/. An average annual 5000 RMB stipend will be awarded to every student based his academic research performance by his supervisor.
ATTACHMENTS
Relevant classic books, major relevant academic journals, course content and principle investigators
I. Proposal
Graduate students are required to present the research proposal in the 1stacademic year. A student should consult with his supervisor to determine his research project and present the proposal to his advisor committee using power point or similar tools. The proposal should cover detail research content and background of the proposed research project including rational, material, methods and strategy, preliminary result and feasibility, key creative points and problems to be solved. Student is required to answer the questions raised by member of advisor committee after the presentation. The performance will be recorded to judge the quality of the proposal.
II. Relevant classic books,
1.Alison M. Smith, Robert Sablowski, Cathie Martin, Jonathan Jones, Nick Harberd, Liam Dolan, George Coupland, Abigail Amey, Plant Biology, Press: Garland Publishing Inc, Publication Date: June 1, 2006, ISBN: 0815340257.
2.Alberts B, Johnson A, Lewis J, et al.Molecular Biology of the Cell. 4th edition.New York: Garland Science; 2002.
3.Albert et al., Molecular Biology of the Cell, Garland Publishing (can be accessed freely through PubMed Bookshelf) 2008.
4.Basic Concepts of X-Ray Diffraction, byEmil ZolotoyabkoPublication Date: April 21, 2014 | ISBN-10: 3527335617 | ISBN-13: 978-3527335619 | Edition: 1.
5.Biochemistry By Reginald H. Garret and Charles M. Grisham.
6.Biology of Aging Macieira-Coelho, Alvaro Springer-Verlag, Berlin and Heidelberg GmbH & Co. K (2002-10).
7.Brown TA.Genomes. 2nd edition.Oxford: Wiley-Liss; 2002.
8.Culture of Animal Cells: a Manual of Basic Technique.
9.Fundamentals of Molecular Virology, byNicholas H. AchesonPublication. Date: August 30, 2011| ISBN-10: 0470900598 | ISBN-13:978-0470900598| Edition: 2.
10.Gomperts, B.D.; Kramer, L.M. and Tatham, P.E.R. Signal Transduction. Academic Press 2009 .
11.Hancock, J. Cell Signalling. Oxford University Press. 3rd edition. 2010.
12.Joseph W. Lengeler, Gerhart Drews & Hans G. Schlegel.Published Online 2009 “Biology of the Prokaryotes Global Regulatory Networks and Signal Transduction Pathways (Chapter 20. Global Regulatory Networks and Signal Transduction Pathways).
13.Introduction to Proteins: Structure, Function, and Motion (Chapman & Hall/CRC Mathematical & Computational Biology), byAmit Kessel,Nir Ben-Tal, Publication Date: December 17, 2010| ISBN-10: 1439810710 | ISBN-13: 978-1439810712 | Edition: 1.
14.Nelson, J. Structure and function in cell signalling. John Wiley and Sons, 2008.
15.Modern X-Ray Analysis on Single Crystals: A Practical Guide. byPeter Luger(Author). Publisher:Walter de Gruyter & Co; 2nd Revised edition edition (March 17, 2014). ISBN-10:3110308231, ISBN-13:978-3110308235.
16.Lesk, Arthur M.Introduction to protein science : architecture, function and genomics. Oxford University Press, 2004.
17.Molecular biology of the gene, by J. D. Watson.
18.Molecular Biology: Understanding the genetic revolution (2nd edition, with annotations in Chinese), David Clark, Science Press of China, 2007.
19.Molecular Biology of the Cell (4th edition), Alberts B, Johnson A, Lewis J, et al. New York: Garland Science, 2002.
20.Molecular Biology (2nd edition), Robert F. Weaver, The McGraw-Hill Companies, 2001.
21.Molecular Biology of Cancer: Translation to the Clinic, Ruddon, Raymond, Academic Press (2010-12).
22.Molecular Cloning 3rd edition.
23.Northrop, Robert B.Introduction to molecular biology, genomics and proteomics for biomedical engineers.CRC Press/Taylor & Francis, 2009.
24.Per Lea, Richard C. Leegood, Plant Biochemistry and Molecular Biology, Press: Wiley, Publication Date: March 22 , 1999, ISBN: 0471976830.
25.Principles of Molecular Virology, Fifth Edition, byAlan J. CannPublication Date: September 16, 2011 | ISBN-10: 012384939X | ISBN-13: 978-0123849397 | Edition5.
26.Principles of X-ray Crystallography, byLi-ling OoiPublication Date: May 2, 2010 | ISBN-10: 0199569045 | ISBN-13: 978-0199569045 | Edition: (first edition).
27.Progress in Nucleic Acid Research and Molecular Biology, Conn, Dr. P. Michael, Academic Press Inc (2008-11).Proteins: Structure and Function,byDavid Whitford. Publication Date: April 29, 2005 | ISBN-10: 0471498947 | ISBN-13: 978-0471498940 | Edition: 1.
28.Regulatory Mechanisms in Transcriptional Signaling, Chakravarti, Debabrata (Debu), Academic Press Inc (2009-09).
29.Short Protocols in Protein Science.
30.Short Protocols in Molecular Biology.
31.The Double Helix by James D. Watson.
32.The Selfish Gene by Richard Dawkins.
33.Virology: Principles and Applications, byJohn Carter,Venetia Saunders, Publication Date: May 6, 2013 | ISBN-10: 1119991420 | ISBN-13: 978-1119991427 | Edition: 2.
34.Wiley-VCH Verlag GmbH & Co.KGaA,Handbook of genome research : genomics, proteomics, metabolomics, bioinformatics, ethical and legal. edited by Christoph W. Sensen. 2005.
35.Wolfram Weckwerth, Gunter Kahl, The Handbook of Plant Metabolomics, Press: Wiley-VCH Verlag GmbH, Publication Date: April 23, 2013, ISBN: 3527327770 .
36.X-Ray Crystallography,byGregory S. Girolami. Publisher:University Science Books,U.S. (August 1, 2014) ISBN-10:1891389777; ISBN-13:978-1891389771.
37.St. Clair, Caroline and Jonathan Visick. Exploring Bioinformatics: a Project-Based Approach, 2010, Jones & Bartlett.
38.Claverie, Jean-Michel and Cedric Notredame.Bioinformatics for Dummies, 2nd Edition, 2007, Wiley.
39.Westhead, D.R., J.H. Parish and R.M. Twyman. Instant Notes: Bioinformatics, 2002, BIOS Scientific Publishers Ltd.
40.Xiong, Jin. Essential Bioinformatics, 2006, Cambridge University Press.
41.Campbell, A. Malcolm and Laurie J. Heyer. Discovering Genomics, Proteomics & Bioinformatics, 2nd edition, 2007, Pearson Benjamin Cummings.
42.Baxevanis, Andreas D. and B.F. Francis Ouellette (editors). Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, 3rd edition, 2005, Wiley.
43.Gibas, Cynthia & Per Jambeck. Developing Bioinformatics Computer Skills, 2001, O’Reilly.
44.Zvelebil M J, Baum J O. Understanding bioinformatics, 2008, Garland Science.
III.Relevant academic journals
1.Algorithms for Molecular Biology
2.Annual review of Biochemisrty
3.Annual review of Genetics
4.Annual review of Genomics and Human Genetics
5.Advances in Genetics
6.American Journal of Human Genetics
7.Annals of Human Genetics
8.Biochemistry
9.Bioinformatics
10.BMC Bioinformatics
11.BMC Evolutionary Biology
12.BMC Genomics
13.BMC Genetics
13.BMC Systems Biology
14.Cell
15. Cell Signal
16. Cell Research
17.Critical reviews in Biochemistry and Molecular Biology
18.Current Oppinion in Genetics & Development
19Current Bioinformatics
20.Cancer Research,
21.Computers in Biology and Medicine
22.Computational Biology and Chemistry
23.EMBO J
24.European Journal of Human Genetics
25.Evolution
26.Evolutionary Bioinformatics
27.Genes & Development
28.Genome Biology and Evolution
29.Genome Research
30.Human Molecular Genetics
31. Human Genetics
32.International Journal of Biochemistry & Cell Biology
33.Journal of Biological Systems
34.Journal of Biological Chemistry
35.Journal of Computational Biology
36.Journal of Mathematical Biology
37. Molecular Biology and Evolution
38.MOLECULAR GENETICS AND GENOMICS
39.MOLECULAR GENETICS AND METABOLISM
40.Nature,
41.Nucleic Acids Research
42.Nature Communication
43.NATURE GENETICS
44.Nature Methods,
45.Oncogene
46.Plant Cell,
47.PLOS Computational Biology
48.PLoS Genetics
49.Proteomics
50.Proc Natl Acad Sci USA
51.Proteins-structure Function and Genetics
52.Science,
53.Systematic Biology
54.THEORETICAL AND APPLIED GENETICS
55.TRENDS IN GENETICS
The Course Syllabus for Overseas Postgraduate Students
I.Fundamental Theoretical courses
Course code:071000B1701
1. Biochemistry
Ⅰ. Scheduled total hours:32(experiments:0 hours) credits:2 term: I
Teaching method:Lecture and seminar Assessment method:Essay Report
Ⅱ.Compatible Major:Biology, Medicine, Agriculture, Pharmacology
Ⅲ.prerequisite course:Principle of biochemistry
Ⅳ.OBJECTIVE:
This course is one of fundamental part for modern biology education. The students participated this course are encouraged to understand the basics of biochemical reactions such as properties of solvents, properties of amino acids, metabolism of macro-molecules, enzyme catalyzed reaction, thermodynamics and kinetics, substrate transportation and energy metabolism. The most common techniques in biochemistry will also be covered in this course.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
1.Development of Biochemistry (6h)
Evolution of organisms and characteristic of macromolecules
Water: The Medium of Life
Development of Biochemistry and research on macromolecules
2.Structure and Function of Proteins and protein folding (6h)
Proteins: the primary structure and sequencing polypeptide
Proteins: secondary, tertiary, quaternary structure
Protein structure determination by NMR or crystallography
3. Enzyme Kinetics (6h)
Binding Analysis: for Binding Constants and Numbers of Sites
Steady State Enzyme Kinetics
Transient State (Fast) Kinetics
4.Structure and Function of Nucleic Acids (6h)
Structure and function of DNA and RNAs
Gene expression: concepts and basic procedure
Produce recombinant protein from prokaryotic and eukaryotic model organisms
5.Common biochemical techniques (8h)
PCR, RT-PCR, Real time PCR
Protein production and purification
Protein detection by western blotting, ELSA or immuno-fluorescence analysis
Protein identification by MADI-TOF-TOF mass spectrometry
Radio-ligand binding assay
Experiment:no experiment(0 h)
Ⅵ.Teaching Materials and Reference Books:
1.Biochemistry By Reginald H. Garret and Charles M. Grisham.
2.ANNUAL REVIEW OF BIOCHEMISTRY
3.CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY
4.INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
5.Biochemistry、
6.Journal of biological chemistry
Ⅶ.Lecture(s):Haifeng Shi, Jie Gu, Yang Zhou
Ⅷ.the Author who write the Syllabus:Haifeng Shi
Course code:071000B1702
2.Molecular Biology
Ⅰ. Scheduled total hours: 40 (experiments:0credits) credits:2term:I
Teaching method:Class teaching Assessment method:Essay Report
Ⅱ.Compatible major:Biochemistry and molecular biology
Ⅲ. Prerequisitecourses:Biochemistry, cell biology, genetics, microbiology
Ⅳ.OBJECTIVE:
The study of Molecular Biology helps students to understand biological processes at molecular level. The students are expected to learn detailed mechanisms of gene expression and regulation, DNA replication, DNA recombination and transposition in both prokaryotes and eukaryotes. They are also expected to understand the principles of major molecular biological experiments that led to acquisitions of the above knowledge.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1. Introduction(2 hours)
⑴. Overview
⑵. Molecular character of genes
3. Gene function
Chapter 2. Methods in Molecular Biology(4 hours)
⑴. Methods in Molecular cloning
⑵. Molecular tools for studying gene and gene activity
Chapter 3. Transcription in Prokaryotes(8 hours)
⑴. Transcription elements of Prokaryotes
⑵. Operons: fine control of prokaryotic transcription
⑶. Major shifts prokaryotic transcription
⑷. DNA and protein interaction in prokaryotes
Chapter 4. Gene Transcription in Eukaryotes(8 hours)
⑴. RNA polymerase and its promoter in Eukaryotes
⑵. General transcription factors in Eukaryotes
⑶. Transcriptional activators in Eukaryotes
⑷. Chromatin structure and its effects on transcription
Chapter 5. Post-transcriptional events(4 hours)
⑴. Splicing
⑵. Capping and polyadenylation
⑶. Other events
Chapter 6. Translation(4 hours)
⑴. Transcription mechanism 1: Initiation
⑵. Transcription mechanism 2: Elongation and termination
⑶. Ribosomes and transfer RNA
Chapter 7. DNA Replication, Recombination and Transposition(10 hours)
⑴. DNA replication I: Basic mechanism and enzymology
⑵. DNA replication II: Detailed mechanism
⑶. Homologous recombination
⑷. Site-specific recombination and transposition
Ⅵ.Textbooks and major reference books
⑴. Molecular Biology (2nd edition), Robert F. Weaver, The McGraw-Hill Companies, 2001.
⑵. Molecular Biology: Understanding the genetic revolution (2nd edition, with annotations in Chinese), David Clark, Science Press of China, 2007.
⑶. Molecular Biology of the Cell (4th edition), Alberts B, Johnson A, Lewis J, et al. New York: Garland Science, 2002.
Ⅶ.Teacher: Liang Chen
Ⅷ.Outline Written by Wang Yong
Course code:071000B1703
3.Molecular Oncology
Ⅰ.Scheduled total hours: 24 (experiments: 0 hours) credits: I term:
Teaching method:lecture, Assessment method:Write a report
Ⅱ.Compatible Major:Medicine, pharmacology, cell biology, molecular biology,
Ⅲ.prerequisite course:Cell biology
Ⅳ.OBJECTIVE:
Molecular Oncology course highlights new discoveries of tumorigenesis, approaches, as well as technical developments, in basic, clinical and discovery-driven translational research. This course contributes students o better understand tumorigenesis and research technology, cancer therapy.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Charpter 1. What is the tumor? Why we will get tumor?(2 hours)
Charpter 2. Tumorigenesis mechanism(4 hours)
Charpter 3. Tumorigenesis signal pathway(4 hours)
Charpter 4. Oncogene(4 hours)
Charpter 5. Tumor suppressor protein(4 hours)
Charpter 6. Protein posttranscriptional modification and tumorigenesis(4 hours)
Charpter 7Cancer therapy(2 hours)
Experiment:None1.(0 hours)
Ⅵ.Teaching Materials and Reference Books:
1.None
Ⅶ.Lecture(s): Yongzhong Hou
Ⅷ.the Author who write the Syllabus:Yongzhong Hou
Course code:071000B1704
4.Bioinformatics
Ⅰ. Scheduled total hours:24(experiments:6hours) credits:2 term:I
Teaching method:Class teaching+Practice on computer,Assessment method:Exam (Open)
Ⅱ.Compatible Major:Biochemistry&Molecular Biology, Botany, Microbiology, Pharmacognosy, Molecular Medicine, Oncology, etc.
Ⅲ.prerequisite course:Molecular Biology, Biostatistics, Fundamentals of Computer.
Ⅳ.OBJECTIVE:
Master the basic principles and methods of bioinformatics,become knowledgeable about the principal bioinformatics databases, softwares and online tools, enable students to have the ability of biological data search, process and analysis.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1 Introduction(2 credits)
1.The definition, scope, origin and development of Bioinformatics
2.The biological basis of Bioinformatics
3.The computer basis of Bioinformatics
Chapter 2 Bioinformatics databases(4 credits h)
1.The type of Bioinformatics databases and their data formats
2.Nucleotide sequence databases (GenBank, EMBL, DDBJ, etc.)
3.Protein sequence databases (PIR, UniProt, InterPro, etc.)
4.Protein structure databases (PDB, SCOP, CATH, FSSP, etc.)
5.Other relevant databases
Chapter 3 Sequence alignment(2 credits h)
1.The basis of sequence alignment (similarity and homology, substitution, indel, etc.)
2.The methodological principles and statistical significance
3.BLAST and FASTA
4.Other relevant softwares and online tools (Clustal, Muscle, etc.)
Chapter 4 Molecular evolution analyssis(4 credits h)
1.The basic principle and concepts of molecular evolution
2.Molecular evolution models, parameters and main analysis steps
3.Phylogenetic methods (NJ, MP, ML, Bayes, etc.)
4.Relevant softwares and tools (MEGA, Phylip, PAUP, PAML, etc.)
Chapter 5 Genome analysis(2 credits h)
1.The characteristic of genome
2.Genome sequence analysis and evaluation methods
3.The gene prediction, UTR and regulatory element identification
4.Comparative genomics
Chapter 6 Protein sequence and structure analysis(4 credits h)
1.Computation and analysis of polypeptide physicochemical property
2.Protein secondary structure and classification
3.Protein structure prediction and modeling
4.Tools on proteomics analysis
Experiment:Practise using common biological databases and bioinformatics tools on computer.(6 credits h)
1. The use of common molecular biology databases including data retrieval and information extraction.
2. Molecular evolution analysis (using Clustal, MEGA, Phylip and so on)
3. The use of frequently-used bioinformatics softwars (DNAStar, Primer, AnthePro, Swiss-PDBViewer, etc.)
Ⅵ.Teaching Materials and Reference Books:
1. Mount D W. Bioinformatics: Sequence and genome analysis. New York: Cold Spring, 2004.
2. Zvelebil M J, Baum J O. Understanding bioinformatics, 2008, Garland Science.
Ⅶ.Lecture(s):Jun Cao,Yanhua Yang
Ⅷ.the Author who write the Syllabus:Jun Cao, Yanhua Yang
II. Specialized core Courses
Course code:071000C1701
1.Instrumental Analysis and Experimental Technology in Biology
Ⅰ.Scheduled total hours:24 (experiments:18hours) credits:2 term:Ⅰ
Teaching method:Class teachingAssessment method:Other,evaluate experiment performance
Ⅱ.Compatible Major:Biology
Ⅲ.prerequisite course:None
Ⅳ.OBJECTIVE:
The purpose of the course is to help the students to understand the working principles of certain instruments, learn the operational protocol of a given instrument and the relevant experiment method.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1 Cell culture and Transgenic technology(2 credits h)
Chapter 2 Common techniques in protein detection(2 credits h)
Chapter 3 Techniques in molecular cloning (2 credits h)
Experiment:
1. DNA digestion and agarose gel electrophoresis(3 credits h)
2. Preparation and transformation of competent cells(3 credits h)
3. PCR and cloning(3 credits h)
4. Cell culture(3 credits h)
5. Immunofluorescence staining and ELISA(3 credits h)
6. Two dimensional gel electrophoresis and western-blot(3 credits h)
Ⅵ.Teaching Materials and Reference Books:
1. Molecular Cloning 3rd edition
2. Culture of Animal Cells: a Manual of Basic Technique
3. Short Protocols in Protein Science,
4. Short Protocols in Molecular Biology
Ⅶ.Lecture(s):Peng Lv
Ⅷ.the Author who write the Syllabus:Peng Lv
III.Elective Courses
Course code:071000D1701
1.Molecular genetics
Ⅰ. Scheduled total hours:32(experiments:0 hours) credits:2 term: I
Teaching method:Lecture and seminar Assessment method:Essay Report
Ⅱ.Compatible Major:Biology, Medicine, Agriculture, Pharmacology
Ⅲ.prerequisite course:Principle of biology
Ⅳ.OBJECTIVE:
This course is one of fundamental part for modern biology education. The students participated this course are encouraged to understand the basics of the structure, and function of nucleic acids, to know the basics of DNA replication in prokaryotes and eukaryotes and the basics of transcription, translation, transcriptional control, and post-transcriptional control in prokaryotes and eukaryotes. The most common techniques in molecular genetics will also be covered in this course.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
1. Introduction: What Is a Gene? (6 h)
1. Genes and DNA. Mendelian inheritance, Non-Mendelian inheritance
2. Genes code for distinct proteins
3. Alleles, mutations, dominant and recessive genes
4. Re-evaluating the gene concept.
2. Identifying and analyzing functional genes (6 h)
5. Genetic variation & genetic mapping
6. Gene cloning strategies
7.Positional cloning
8. Transposons & gene discovery
9. Reverse genetics
3. Genomes and sequence analysis (6 h)
10. Background, bacterial genomes
11. Animal genomes; human genome
12. Human genome variation/evolution
13. Functional genomics
4. Regulation of Gene Transcription (8 h)
14. Prokaryotic transcription
15. Prokaryotic gene regulation
16. Prokaryotic gene regulation
17. Eukaryotic transcription: basal level & TFs
18. Eukaryotic transcription activation, chromatin
19. Eukaryotic transcription: Negative reg.
20. Epigenetic controls
5. Other aspects of gene regulation (6 h)
21. RNA processing, alternate splicing
22. Translational control, RNA stability
23. RNA mediated gene regulation
Ⅵ.Teaching Materials and Reference Books:
1. The Double Helix by James D. Watson and Molecular biology of the gene, by J. D. Watson.
2. The Selfish Gene by Richard Dawkins is also recommend for reading
3. NATURE GENETICS
4. ANNUAL REVIEW OF GENETICS
5. TRENDS IN GENETICS
6. HUMAN GENETICS
7. ADVANCES IN GENETICS
Ⅶ.Lecture(s):Haifeng Shi, Jie Gu
Ⅷ.the Author who write the Syllabus:Haifeng Shi
Course code:071000D1702
2.Functional Genomics
1. Planned total class hours :32Credits. : 2 Semester:
Teaching method: classroom teaching Examination method: Report
2. Applicable major: Biochemistry and molecular biology
3. Preparatory course: Molecular biology
4. Instructional objective:
The objective is to understand the genes function in the context of the genome, analyze the transcriptome and proteome and explain the relationship between the structure and function of gene products, and the interaction of biomolecules.
5. Syllabus content and assignment
First chapter ……………Introduction(2 hours)
1.……………GenomicsIntroduction
2.……………Summary of Genomics expression
3.……………Concept and Role of Functional Genomics
Second chapter……………DNA Technology(2 hours)
1.……………Recombinant DNA technology
2.……………DNA cloning
Third chapter………Genomic mapping(3 hours)
1. ……………Genetic map
2. ……………Physical map
Fourth chapter………Genome sequence(2 hours)
1. ……………DNA sequencing method
2. ……………DNA sequences assembly
Fifth chapter………Reading Genome(3 hours)
1. ……………Gene localization
2. ……………Technology for Gene localization
3. ……………Study methods of a single gene function
Sixth chapter……………From Genome to Genome function(2 hours)
1. ……………Transcriptome and its study methods
2. ……………Proteome and its study methods
Seventh chapter……………Eukaryote nuclear genome(3 hours)
1. ……………Physical characteristics ofchromosome
2. ……………Hereditary feature of chromosome
3. ……………Functional classification of genes on nuclear genome
Eighth chapter……………Prokaryotic genome and Eukaryotic organelle genome(2 class hours)
1. ……………Physical characteristics ofProkaryotic genome
2. ……………Hereditary feature of Prokaryotic genome
3. ……………Physical characteristics of Eukaryotic organelle genome
4. ……………Hereditary feature of Eukaryotic organelle genome
Ninth chapter……………Viral genome and mobile genetic element(2 hours)
1. ……………Phage and Eukaryotic viruses genome
2. ……………Mobile genetic element
Tenth chapter……………Chromatin modification and genome expression(2 class hours)
1. ……………Chemical modification of histones
2. ……………Nucleosome remodeling
3. ……………DNA modification
4. ……………Genome expression
Eleventh chapter……………Regulation of Genome Activity(3 hours)
1. ……………Transient variation of Genome Activity
2. ……………Permanent and semi-permanent changes of Genome Activity
3. ……………Regulation of genome activity during development
Twelfth chapter……………Current progresses on functional genomics researches(6 class hours)
6. reference books
1) Alberts B, Johnson A, Lewis J, et al.Molecular Biology of the Cell. 4th edition.New York: Garland Science; 2002.
2) Brown TA.Genomes. 2nd edition.Oxford: Wiley-Liss; 2002.
3) Wiley-VCH Verlag GmbH & Co.KGaA,Handbook of genome research : genomics, proteomics, metabolomics, bioinformatics, ethical and legal.edited by Christoph W. Sensen. 2005.
4) Lesk, Arthur M.Introduction to protein science : architecture, function and genomics.Oxford University Press, 2004.
5) Northrop, Robert B.Introduction to molecular biology, genomics and proteomics for biomedical engineers.CRC Press/Taylor & Francis, 2009.
6.The teacher:Xiao-li Tan, Zheng Wang
7.Outline writer:Xiao-li Tan, Zheng Wang
Course code:071000D1703
3.Progress in Life Science
Ⅰ. Scheduled total hours:24 (experiments:0hours) credits:2 term:I
Teaching method:Class teaching and Seminar, Assessment method:Essay Report
Ⅱ.Compatible Major:Biology
Ⅲ.prerequisite course:None
Ⅳ.OBJECTIVE:
This class is specially designed to help students to understand the newest research findings inlife sciences worldwide,to know or even to predict the hotspots in research of current life sciences. This class will also cover partial history of biological researches, especially some interesting stories of the greatest biologists.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1Analysis of elite variety tag SNPs reveals an important allele in upland rice
(4 h)
Chapter 2Combinatorial temporal patterning in progenitors expands neural diversity(4 h)
Chapter 3High-resolution analysis with novel cell-surface markers identifies routes to iPS cells(4 h)
Chapter 4Obesity susceptibility loci and dietary intake in the Look AHEAD Trial
(4 h)
Chapter 5Cytolytic nanoparticles attenuate HIV-1 infectivity(4 h)
Summary and Discussion
Ⅵ.Teaching Materials and Reference Books:
1. Lyu, J., et al., Analysis of elite variety tag SNPs reveals an important allele in upland rice. Nat Commun, 2013. 4: p. 2138.
2. Bayraktar, O.A. and C.Q. Doe, Combinatorial temporal patterning in progenitors expands neural diversity. Nature, 2013. 498(7455): p. 449-55.
3. O'Malley, J., et al., High-resolution analysis with novel cell-surface markers identifies routes to iPS cells. Nature, 2013. 499(7456): p. 88-91.
4. McCaffery, J.M., et al., Obesity susceptibility loci and dietary intake in the Look AHEAD Trial. Am J Clin Nutr, 2012. 95(6): p. 1477-86.
5. Hood, J.L., et al., Cytolytic nanoparticles attenuate HIV-1 infectivity. Antivir Ther, 2013. 18(1): p. 95-103.
Ⅶ.Lecture(s):Weijun Mai
Ⅷ.the Author who write the Syllabus:Weijun Mai
Course code:071000D1704
4.Molecular Virology
1. Total class hours:24 Credit:2 Semester:I
Teaching Methods:Classroom teaching and discussing
Examination mode:Special report
2. Adapted Major:Biochemistry and Molecular Biology,Microbiology and related major
3. Preparatory course:Virology, Molecular Biology
4. The objectives:
Let the students understand the basic theory of molecular virology through the course: to grasp the concept, classification and characteristics of the virus, as well as understand the history of Virology; to master the formation and function of virus particle; to understand the virus genome structure and its complexity, as well as the genetic and variation of virus; to grasp the virus replication cycle and its characteristics; to master the expression regulation of virus genes; to understand the virus infection and pathogenic mechanisms; to know the biological characteristics and research progress of common and emerging viruses.
5. The syllabus and time allocation:
CHAPTER 1:Introduction(2 hours)
1. What are viruses
2. The classification of viruses
3. The history of virology
CHAPTER 2: The virus particle(2 hours)
1. The formation and function of virus particle
2. Capsid symmetry and virus architecture
3. Protein-enucleic acid interactions and genome packaging
4. Virus receptors: recognition and binding
5. Other interactions of the virus capsid with the host cell
CHAPTER 3: The viral genomes(3 hours)
1.Thestructureandcomplexityofvirusgenomes
2.The characteristics of virus genomes
3. DNA viruses
4. RNA viruses
5. Segmented and multipartite virus genomes
6. Reverse transcription and transposition
7. Evolution and epidemiology
CHAPTER 4: The replication of viruses(4 hours)
1.Overview ofVirusReplication
2. The replication cycle
3. The interaction between viruses and receptors of host cell
4. The molecular mechanisms of virus invasion
5. The replication of DNA viruses
6. The replication of RNA viruses
7. The assembly, mature and release of viruses
CHAPTER 5: Control of virus gene expression(3 hours)
1. Expression of genetic information
2. Cording strategies of virus genomes
3. Transcriptionalcontrol ofexpression
4. Posttranscriptionalcontrolofexpression
5. Control ofexpressioninbacteriophageλ
CHAPTER 6: Infection(3 hours)
1. Infection of plant viruses
2.Immuneresponses tovirusinfectionsinanimals
3.Viruse-Hostinteractions
4.The Courseofvirusinfections
5.Prevention andtherapy ofvirusinfection
6.Virusvectorsandgenetherapy
CHAPTER 7: Pathogenesis of viruses(3 hours)
1.Mechanisms ofcellular Injury
2. Viruses andimmuno-deficiency
3. Virus-Relateddiseases
4. Celltransformationbyviruses
5. Viruses andcancer
6. Immune pathology of viral infection
CHAPTER 8:Molecular biology of insect viruses(2 hours)
1. Overview of insect viruses
2. Evolution and epidemiology
3. baculovirus expression vector system
4. Molecular diagnostic techniques and control methods of insect viruses
5. Genetically engineered virus insecticide
CHAPTER 9: Common and emerging virus(2 hours)
6. The referent books:
1. Principles of Molecular Virology, Fifth Edition, byAlan J. CannPublication Date: September 16, 2011 | ISBN-10: 012384939X | ISBN-13: 978-0123849397 | Edition: 5. Academic Press.
2. Virology: Principles and Applications, byJohn Carter,Venetia Saunders, Publication Date: May 6, 2013 | ISBN-10: 1119991420 | ISBN-13: 978-1119991427 | Edition: 2. Wiley Press
3. Fundamentals of Molecular Virology, byNicholas H. AchesonPublication. Date: August 30, 2011| ISBN-10: 0470900598 | ISBN-13:978-0470900598| Edition: 2. Wiley Press
4.杜平戚中田潘卫主编 《分子病毒学原理与实验技术》上海第二军医大学出版社2002
5.黄文林、姜勇、董小平、张辉 编《分子病毒学》研究生用书 人民卫生出版社2006第二版
6.李琦涵主编《病毒感染的分子生物学》化学化工出版社
7.吕鸿声著 昆虫病毒分子生物学 中国农业科技出版社1998
8.彭建新编著《杆状病毒分子生物学》2000年
Ⅶ.Lecture(s):Zhaoyang Hu
Ⅷ.the Author who write the Syllabus:Z
Course code:071000D1705
5.Protein Structure, Function and 3-D Structure Resolution by X Ray Crystallography
Ⅰ. Scheduled total hours:24 (experiments: hours)credits:2 term:I
Teaching method:lecture+team discussion Assessment method:attendance+team report+final report
Ⅱ.Compatible Major:Biology, Medicine, Pharmaceutical majors
Ⅲ.prerequisite course:Molecular biology, Biochemistry
Ⅳ.OBJECTIVE:
This course provides postgraduates with advanced understanding about the current progresses in the filed of protein structure and function research. It covers the discussion of the basic “building blocks” of proteins and their biochemical and physical properties, and focuses on the relationship between the structure and function of proteins. It also introduces the current application of X ray Crystallography in the resolution of 3-D structures of protein and/or protein complexes. Students can advance their understanding about the close relationship of structure and function of proteins, and learn how to resolve the crystal structure of proteins. This course can help pave the way for students to carry on their studies related to proteins.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1 The primary structure of protein(4 class hours)
1.The biochemical properties of amino acid
2.The primary structure of protein and analysis method
Chapter 2 The secondary structure of protein(4 class hours)
1.The formation of secondary structure of protein
2.The analysis of secondary structure of proteins
Chapter 3 The tertiary structure of protein(4 class hours)
1.The formation oftertiary structures
2.The analysis oftertiary structures
Chapter 4 The quaternary structure of protein(4 class hours)
1.The formation ofquaternary structures
2.The analysis ofquaternary structures
Chapter 5 The structure and function of proteins(4 class hours)
1.The coordination of the structure and function of proteins
2.The current strategy and technique to study protein structure and function
Chapter 6 The crystal structure of protein(4 class hours)
1.The crystallization of proteins
2.The resolution of protein crystal structures by X ray crystallography
Ⅵ.Teaching Materials and Reference Books:
1. Proteins: Structure and Function,byDavid Whitford. Publication Date: April 29, 2005 | ISBN-10: 0471498947 | ISBN-13: 978-0471498940 | Edition: 1
2.Introduction to Proteins: Structure, Function, and Motion (Chapman & Hall/CRC Mathematical & Computational Biology), byAmit Kessel,Nir Ben-Tal, Publication Date: December 17, 2010| ISBN-10: 1439810710 | ISBN-13: 978-1439810712 | Edition: 1
3. Principles of X-ray Crystallography, byLi-ling OoiPublication Date: May 2, 2010 | ISBN-10: 0199569045 | ISBN-13: 978-0199569045 | Edition: (first edition)
4. X-Ray Crystallography,byGregory S. Girolami. Publisher:University Science Books,U.S. (August 1, 2014) ISBN-10:1891389777; ISBN-13:978-1891389771
5. Basic Concepts of X-Ray Diffraction, byEmil ZolotoyabkoPublication Date: April 21, 2014 | ISBN-10: 3527335617 | ISBN-13: 978-3527335619 | Edition: 1
6. Modern X-Ray Analysis on Single Crystals: A Practical Guide. byPeter Luger(Author). Publisher:Walter de Gruyter & Co; 2nd Revised edition edition (March 17, 2014). ISBN-10:3110308231, ISBN-13:978-3110308235
Ⅶ.Lecture(s):Hengchuan Xia
Ⅷ.the Author who write the Syllabus:Hengchuan Xia
Course code:071000D1706
6.Cell Signal Transduction
Ⅰ. Scheduled total hours:40(experiments: 0 hour) credits:2 term: I
Teaching method:Class teaching and Seminar Assessment method:Exam(Open)and Essay Report
Ⅱ.Compatible Major:Biology,Medical inspection,Pharmacy
Ⅲ.Prerequisite course:Molecular biology,Biochemistry,Cell biology
Ⅳ.OBJECTIVE:
This course is one of the important couses for the major of biology."Signal Transduction" or "Signaling" is the process by which biological information is transferred. Signaling happens at multiple levels, from interactions between species in ecological systems to interactions between molecules inside a cell.This course aims at introducing the students to the basic components and properties of the major cell signaling pathways, with special emphasis on how they are switched on and off,and how they are regulated.
This course will helpa broad audience of students from Biological/Biomedical Sciences (including those considering medical school) interested in furthering their understanding of how cells regulate and coordinate their core activities.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1:Introduction:signaling origin and classics……………(2 credits h)
Chapter2:First messenger………… …(2creditsh)
Chapter3:Receptor……………(2creditsh)
Chapter4:GTP binding protein and signal transduction…………(1creditsh)
Chapter5:Enzymatic effectors that coupling with GTP binding protein(1creditsh)
Chapter 6:intracellular calcium and effector ………… …(2 credits h)
Chapter7:Phosphorylation and dephosphorylation:Protein kinase A and C(2 credits h)
Chapter 8:Nuclear receptor ……………(2 credits h)
Chapter9:All types ofsignal transduction pathways……………(2 credits h)
Chapter10:Specific interventions of signaling pathway fortherapeutic or research purpose……………(2 credits h)
Chapter 11:Protein domains and signal transduction ……………(2 credits h)
Ⅵ.Teaching Materials and Reference Books:
1.Albert et al.,Molecular Biology of the Cell,Garland Publishing (can be accessed freely through PubMed Bookshelf) 2008
2.Nelson, J.Structure and function in cell signalling.John Wiley and Sons, 2008
3. Hancock, J.Cell Signalling.Oxford University Press. 3rd edition. 2010
4. Gomperts, B.D.; Kramer, L.M. and Tatham, P.E.R.Signal Transduction.Academic Press 2009
Ⅶ.Lecture(s):Jian Lu
Ⅷ.the Author who write the Syllabus:Jian Lu
Course code:071000D1707
7.Plant Molecular Biology
Ⅰ. Scheduled total hours: 24 (experiments: hours) credits:2 term:I
Teaching method:lecture and discussion Assessment method:open-book examination
II、Major: Biochemistry and Molecular Biology, Botany
III、Preparatory courses: Molecular Biology, Genetics, Plant Physiology
IV、Teaching objective:
Thiscoursebegins with a review of what is known about the origins of modern-day plants. Next, the special features of plant genomes and genetics are explored. Subsequent chapters provide information on our current understanding of plant cell biology,plantphotosynthesis and respiration,plant metabolism, and plant developmental biology, with the remaining chapters outlining the recent advances in plantproteomics and plant metabolomics.The final chapter discusses the relationship of plants with humans: domestication, agriculture and crop breeding.
In a word, this course providesundergraduate and graduate studentswith molecular biological understanding of complex biological problems aboutmodern plant science, reflecting recent advances in genetics and genomics and the excitement they have created. Meanwhile, this course can help pave the way for students to carry out their studies related to plant molecular biology.
V、Outline of the contents and time allocation:
Chapter 1 The origins of modern-day plants(2 hours)
Chapter 2 Plant genetics and functional genomics(4 hours)
1. Development and trends of plant genetics
Characteristics and trends of contemporary plant genetics
Status and role of plant genetics
The relationship between plant genetics and other disciplines of life science
Practical significance of plant genetics
2. Plant functional genomics
The historical development of plant functional genomics
The basic concept and research content of functional genome
Methods for analyzing genome function
Research status of representative plant functional genes
Chapter 3 Plant signals and signal transduction(2 hours)
1. Plant signal transduction
Signaling in plant cells
Recipient
Transmembrane signal transduction
Intracellular signaling molecule
Reversible phosphorylation of protein
2. Molecular mechanism of plant hormone signal transduction
Protein selective degradation ubiquitin/proteasome pathway
Molecular mechanism of auxin
Visfatin signal transduction
Chapter 4 Plant photosynthesis and respiration(4 hours)
1. Plant photosynthesis
The basic structure and properties of chloroplasts
Mechanism of photosynthesis
Internal and external factors affecting photosynthesis
Regulation of C3 and C4 pathway
Relationship between light energy utilization and crop biomass
2. Plant respiration
The concept, physiological significance and place of respiration
Respiratory metabolism of plants
Energy storage and utilization during respiration
Factors affecting respiration
Respiration and agricultural production
Chapter 5 Natural products chemistry (secondary metabolism)(2 hours)
1. The interaction of various organic metabolites
2. Terpenoids
3. Phenols
Chapter 6 Plant proteomics(2 hours)
1. The concept of proteome
2. The research techniques of proteomics
3. Advances in plant proteomics
4. Application and developmental trend of plant proteomics
Chapter 7 Plant metabolomics(2 hours)
1. The concept and significance of plant metabolomics
2. The role of metabonomics in system biology
3. Research methods of plant metabolomics
4. Application of metabonomics in plant science
Chapter 8 The relationship of plants with humans(2 hours)
Analysis and discussion(4hours)
VI、Teaching materials and reference books:
1. Alison M. Smith, Robert Sablowski, Cathie Martin, Jonathan Jones, Nick Harberd, Liam Dolan, George Coupland, Abigail Amey, Plant Biology, Press: Garland Publishing Inc, Publication Date: June 1, 2006, ISBN: 0815340257
2. Wolfram Weckwerth, Gunter Kahl, The Handbook of Plant Metabolomics, Press: Wiley-VCH Verlag GmbH, Publication Date: April 23, 2013, ISBN: 3527327770
3. Per Lea, Richard C. Leegood, Plant Biochemistry and Molecular Biology, Press: Wiley, Publication Date: March 22 , 1999, ISBN: 0471976830
4. Xiaoya Cheng, Hongwei Xue ed. Plant Physiology and Molecular Biology (Fourth Edition), Higher Education Press (June 1, 2012) | ISBN: 9787040351552
5. Haiyan Yan ed. Plant Developmental Molecular Biology, Science Press (First Edition) (May 1, 2012) | ISBN: 9787030340542, 703034054X
VII、Instructor:Yanhua Yang
VIII、Writer:Yanhua Yang
Course code:071000D1708
8.Global Regulatory Network and Signal Transduction in Bacteria
Ⅰ. Scheduled total hours: 32 (experiments: 0credits) credits: Ⅱ term:
Teaching method:Classroom teachingandseminars
Assessment method:Essay Report
Ⅱ.Compatible Major:Biochemistry and molecular biology,pharmacognosy
Ⅲ.prerequisite course:Biochemistry, General biology, Molecular biology, Microbiology
Ⅳ.OBJECTIVE:
This course will give an introduction to the fundamentals of the global regulatory network and signal transduction, and will cover the principles of global control of gene expression in bacteria, how these regulatory networks contribute tothe adaptation of the cell to the changed conditions and the interactions with hosts, as well as impact on virulence, secondary metabolism, motility and social behaviors etc. Progress in our understanding of and ability to manipulate these networks will have an enormous impact on a wide range of subjects ranging from microbial pathogenesis to ecology and biotechnology. In addition, the concepts and tools that emerge from experimental and theoretical work on bacterial regulatory networks are likely to be broadly applicable outside prokaryotic biology.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1 Introduction(3 h)
1. The concepts, levels and modes of control of gene expression in bacteria
2. Constitutive, inducible and suppressive gene expressions
3. Operon: the coordination unit of gene expression
4. Regulon and modulon
Chapter 2 Regulation of transcription initiation(6 h)
1. The composition of lactose operon and regulatory mechanism
● The composition of lactose operon
●Lacrepressor and the activator CAP
● The mechanism of the binding of regulatory proteins to their sites
2. The adjustment of alternative σ factors
● House-keeping gens (rpoD /s70
● Genes expressedduring periods ofstress and stationary-phase growth(rpoS/s38)
● Heat shock genes (rpoH /s32 )
● Nitrogen metabolism genes (rpoN /s54 )
● Flagellar genes(fliA /sF )
●B.subtilis(s43 )
Chapter 3 Regulation oftranscription termination: suppression andattenuation
(3 h)
1. The basic forms of transcription termination
2. The composition of tryptophan operon
3. The attenuator and its regulatory mechanism
Chapter 4 Bacterial cell-cell signaling: Quorum sensing(9 h)
1. The composition of LuxIR-type QS system
2. Types and diversity ofQS signal molecules
3.Role of QS
4.AI-2 QS regulatory system
5. Integration with other regulatory networks
6.AHL, as bacteria new signal molecules, can be used in communication between bacteria and eukaryotic hosts
Chapter 5Two-component signal transduction system(3 h)
1.The composition of GacS/GacA two-component signal transduction system
2.Signaltransductionmechanism
3.Regulation at the transcriptional and translational levels
4.Interaction with othersignaling pathways
Chapter 6 Post-transcriptional regulation mediated by RNA binding proteins and sRNAs(9 h)
1. Small non-coding RNAs (sRNAs) in Bacteria
2. Major sRNAs and theirfunctional mechanism
3.RNA chaperon Hfq and its function
4. RsmA and RsmB/C form the Rsm system
Chapter 7The intracellular second message C-di-GMP signaling(1.5 h)
Chapter 8 ppGpp and a response to poor growth environment(1.5 h)
Ⅵ.Teaching Materials and Reference Books:
1.Joseph W. Lengeler, Gerhart Drews & Hans G. Schlegel.Published Online 2009 “Biology of the Prokaryotes Global Regulatory Networks and Signal Transduction Pathways (Chapter 20. Global Regulatory Networks and Signal Transduction Pathways)
2. Biology of the prokaryotes. Lengeler et al.
3.www.nottingham.ac.uk/quorum, this web site is included in the ISI current web contents
4.http://www.mpiib-berlin.mpg.de/research/RNABiology.htm
5. http://www.unil.ch/dmf/page14869.html
Ⅶ.Lecture(s):Xiaoguang Liu
Ⅷ.the Author who write the Syllabus:Xiaoguang Liu
Course code:071000D1709
9. Cell Biology
Ⅰ. Scheduled total hours:26(experiments:0credits) credits: 2 term:I
Teaching method:Classroom teachingandseminars
Assessment method:Essay Report
Ⅱ.Compatible Major:Biochemistry and molecular biology,Biology,
Ⅲ.prerequisite course:Biochemistry, biology, Molecular biology, Immunology
Ⅳ.OBJECTIVE:
This course will give an introduction to the fundamentals of the cell biology and the major methods, and major cell activity events such as autophagy, proliferation, apoptosis and signal transduction.Stem cell、iPS、Cancer stem cell;tumor and tumor micro-environment;tumor targeting therapy etc will be covered.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1 Development of Cell Biology and Basic Structure of Cells (2 h)
1. Content and Research Status of Cell Biology
2. Histories and Development of Cell Biology
3. Basic Cell Structure
Chapter 2 Techniques in Cell Biology (3 h)
1. Observation Methods of Cell Morphology
2. Analysis Techniques of Cell Components
3. Cell Culture and Cell Engineering
Chapter 3 Cellular Reproduction and Cell cycle Regulation (3 h)
1. The Cell Cycle and Cell Division
2. Signaling in Cell Cycle Regulation
Chapter 4 Cell Senescence, Apoptosis and Signaling (3 h)
1. Structure Differences and Molecular Mechanisms of Cellular Senescence
2. Structural Differences and Molecular Mechanisms of Apoptosis
3. Progress in Cellular Senescence and Apoptosis
Chapter 5 Autophagy, Cell Stem, iPS, Cancer Stem Cell (5 h)
1. Autophagy and Molecular Mechanism
2. Concepts and Identification of Stem cell, iPS, Cancer Stem Cell
3. Progress in Autophagy, Stem cell, iPS and Cancer Stem Cell
Chapter 6 Tumor and Tumor Microenvironment
(4 h)
1. Cell Coat and Extracellular Matrix
2. Tumor Stromal Cells and Function
3. Interaction Between Tumor Cells and Stromal Cells
Chapter 7 Tumor Targeting immunotherapy
(5 h)
1. Tumorigenesis and Treatment
2. Progress in Tumor Targeting Therapy
Chapter 8 How To Choose Thesis Topic and Design Experiment Scientifically (1 h)
1. Problems of Choosing Research Topic
2. Concise and Refinement Scientific Ideas
3. How To Design Experiment
Ⅵ.Teaching Materials and Reference Books:
1. Darnell, J.et al.Molecular Cell Biology, 5thEdition.New York:W.H. Freeman Co. Avers, C. J..Molecular Cell Biology. Addison-Wesley Publ. Co. 2004
2. Alberts Bet al.Essential Cell Biology. 2ndEdition. New York and London:Garland publishing,Inc. 2004
3. Gerald Karp. Cell and Molecular Biology:concepts and experiments,3rdEdition. Published by John Wiley & Sons, Inc. 2002
Ⅶ.Lecture(s):Feng Yu, Ai-hua Gong, Yang Zhou, Jie Gu
Ⅷ.the Author who write the Syllabus:Feng Yu
Course code:071000D1710
10. Genetic Engineering
Ⅰ. Scheduled total hours:24(experiments:0credits) credits: 2 term:I
Teaching method:Classroom teachingandseminars
Assessment method:Exam
Ⅱ.Compatible Major:Biochemistry and Molecular Biology, Biology, Medicine, Agriculture
Ⅲ.prerequisite course:Principle of Biology, Molecular Biology
Ⅳ.OBJECTIVE:
This course is one of fundamental part for modern biology education. The students participated this course are encouraged to understand the basics concept of genetic engineering, the main techniques and principle of gene engineering, polymerase chain reaction, the kinds of genetic engineering tool enzyme and gene engineering vector, the method of introduction, screening and identification of recombinant DNA, and to master the expression of foreign gene. The most common techniques in molecular biology and biochemistry will also be covered in this course.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
Chapter 1 Introduction (2 hours)
(1) The concept of genetic engineering
(2) The birth and development of genetic engineering
(3) The main content of genetic engineering research
(4) The significance and prospect of genetic engineering
(5) Biochip technology
(6) Human genome project
Chapter 2 The main techniques and principle of gene engineering (2 hours)
(1) The extraction and purification of nucleic acid
(2) Nucleic acid detection and preservation
(3) Gel electrophoresis technique
Chapter 3 Polymerase chain reaction (PCR) (2 hours)
(1) The principle of polymerase chain reaction (PCR) amplification
(2) PCR system
(3) The principle of PCR primer design
(4) The types of PCR
(5) The application of PCR technique
Chapter 4 The tool enzyme of genetic engineering (2 hours)
(1) Restriction endonuclease
(2) DNA ligase
(3) DNA polymerase
(4) Terminal deoxynucleotidyl transferase
(5) Nuclease
(6) T4 phage polynucleotide kinase
(7) Alkaline phosphatase
(8) Methylation enzyme
(9) Ribozyme
Chapter 5 The vector of gene engineering (2 hours)
(1) Plasmid vector
(2) Phage vector
(3) M13 phage vector
(4) Cosmid vector
(5) Other vectors
(6) Expression vector
Chapter 6 Introduction, screening and identification of recombinant DNA (2 hours)
(1) The method of foreign gene into prokaryotic cells
(2) The method of foreign gene into eukaryotic cells
(3)The detection of vector genetic marker
(4) The detection of cloning DNA sequence
(5) The detection of foreign gene products
Chapter 7 The expression of foreign gene (2 hours)
(1) Prokaryotic expression system
(2) Eukaryotic expression system
Ⅵ.Teaching Materials and Reference Books:
1 "Principles of Genetic Engineering" (Volume 1), editedby Wu Naihu, Science Press, 2005 Second Edition
2 "Principles of Genetic Engineering" (Volume 2), edited by Wu Naihu, Science Press, 2003 Second Edition
3 "Genetic engineering principle"edited by Xu Jinlin, Chen Chun, Xu Qin, Science Press, 2014 second edition
4 "Genetic engineering" edited by Long Minnan, Lou Shi Lin, Yang Shengchang, Zhang Jun, Science Press, 2014 third edition
5 "Genetic engineering"edited by Sun Ming, Higher Education Press, 2013 second edition
6 "Gene VIII" edited by Benjamin Lewin, translated by Yu Long, Jiang Songmin, Zhao Shouyuan etc, Science Press, 2005 first edition
7 "Molecular Cloning: A Laboratory Mannual" edited by M.R. Green, translated by He Fuchu, Science Press, 2012 fourth edition
Ⅶ.Lecture(s):Yanhua Yang, Jun Li, Liang Chen, Qiang Wang
Ⅷ.the Author who write the Syllabus:Yanhua Yang
Course code:071000D1711
11. Scientific writing in English
Ⅰ. Scheduled total hours:24(experiments:0credits) credits: 2 term:I
Teaching method:Classroom teachingandseminars
Assessment method:Essay report
Ⅱ.Compatible Major:Biology, Biochemistry, Medicine, Pharmacy, Chemistry
Ⅲ.prerequisite course:College English
Ⅳ.OBJECTIVE:
Through the teaching of this course, the graduate students can master the access to professional literature, collect professional information, use English to summarize scientific research and experiment, use English for biology professional report exchange activities, especially to write, publish a clear logic, fluency High level SCI scientific papers and PCT patents.
Ⅴ.Content of the Syllabus and the Scheduled Study Hours:
1.SCI paper writing
1.1 Introduction (2h)
1.2 SCI research background (1h)
1.3 Research results collation, statistical analysis and chart selection (2h)
1.4 Literature retrieval, acquisition and reading (1h)
1.5 SCI papers written (4h)
1.6 SCI papers submission, repairs, proofreading and publishing (2h)
1.7 About the editorial company (1h)
1.8 Discipline (suspected) of the prevention and academic misconduct (suspect) after the remedy (1h)
1.9 Writing Skills in Chinese and English (2h)
1.10 Discussion on the SCI Division and Impact Factor (1h)
1.11 Case analysis and discussion (2h)
2. PCT patent
2.1 PCT patent review (1h)
2.2 PCT patent application process and fees (1h)
2.3 PCT patent project background (0.5h)
2.4 PCT patent claims (0.5h)
2.5 PCT patent novelty (0.5h)
2.6 PCT patent innovation (0.5h)
2.7 PCT patent implementation case (1h)
Ⅵ.Teaching Materials and Reference Books:
Main reference to online sites such as NCBI, ScienceDirect, SPRINGER LINK, Wiley Online Library, Nature, Science, Cell, PNAS, medsci.cn/, International Patent Cooperation Treaty (PCT), etc.
Ⅶ.Lecture(s):Huayou Chen , Yajing Zhou, Yongzhong Hou, Jun Cao
Ⅷ.the Author who write the Syllabus:Yanhua Yang
V. Brief introduction of principle investigators
1. Prof.. Keping Chen, PhD ,PhD Supervisor
Education Background
2004.1-2004.7, High visiting scholars in Japan's University of Tokyo.
1997 .9 -2000 .6 PhD, Special Economic Animal Breeding , Southwestern University, P.R.China.
1979 .9-1983.6 B.Sc.,Sericulture, Anhui Agriculture University, P.R.China.
Working Experience
2001.1 – Present Professor of Institute oflife science inJiangsu University.
1983. 6 -2000 .12 Associate professor in the Research of Sericulture Institute of Chinese Academy of Agricultural Sciences.
Research Interesting
Silkworm molecular biology; Proteomics; Virus;Surface display of Exogenous gene in Bacillus subtilis.
Contacts
E-mail:kpchen@ujs.edu.cn
Tel & Fax: 0086-511-88791923
2. Prof. Haifeng Shi, PhD , PhD Supervisor
Education Background
2004-2009 Visiting fellow, Liver Diseases Branch, NIDDK, NIH.
1998-2002 Ph.D in Department of Biochemistry, The Hong Kong University of Science & Technology, Hong Kong.
1994-1998 B.Sc in Department of Biochemistry, Nanjing University, P.R. China.
Research Interesting
Biological toxicity of heavy metal such as cadmium, copper and iron;
Cellular iron metabolism; Protein engineering; Functional genetic screen.
Working Experience
2004-2009:Visiting fellow, Liver Diseases Branch, NIDDK, NIH
2001.1 – Present Professor of Institute of life science in Jiangsu University.
Contacts
Email:shihf@ujs.edu.cn
Tel: 15862996375
3. Prof.Yajing Zhou, PhD ,MS Supervisor
Education Background
2002,PhD in Biochemical Engineering, East China University of Science &.Technology, P. R. China.
1998,MS in Biochemical Engineering, East China University of Science &.Technology, P. R. China.
1982,BS in Organic Synthesis, Jiangsu Polytechnic University, P. R. China.
Working Experience
2008– Present Professor of Institute of life science in Jiangsu University.
Research Interesting
Foreign gene expression and protein production in silkworm bioreactor;
DNA replication, repair, and cell cycle regulation (Molecular mechanisms that control DNA replication and their functional regulation in mammalian cells and in model organisms).
Contacts
Email:yajingzhou@ujs.edu.cn
Websites:http://smkx.ujs.edu.cn/en/faculty/doctor/2010-10-14/31.html
4. Prof. Qin Yao, PhD Supervisor
Education Background
1979.9-1983.7 BS in Anhui Agricultural University ,P.R.China.
1990.9-1991.7 Ministry of Agriculture English training.
1996.9-1997.7 MS in Graduate School of Chinese Academy of Agricultural Science ,P.R.China.
Working Experience
2001.10-Present Professor in Insititute of Life Scicences in Jiangsu Universtiy .
1984.11-2001.9 Sericultural Research Institute of Chinese Academy of Agricultural Sciences Silkworm resources project leader.
1983.7-1984.10 Wanna College of Agriculture Agricultural Education Department teacher.
Acdamic and Social part-time: Member of Silkworm Variety Approval Committee of Jiangsu Province.
Research Interesting
Molecular biology of insect viruses.
Composition and structure of insect virus genome, the function and variation of gene;
Exploration of the new biotechnological product, e.g. recombined virus, anti-virus transgenic insect, as well as the molecular breeding technology of anti-virus silkworm.
Contacts
E-mail: yaoqin@ujs.edu.cn
Tel: 0511-88791702
Fax: 0511-88791923
5. Prof. Xiaoguang Liu, PhD ,PhD Supervisor
Education Background
2008-2009 Visiting the University of Nottingham (UK) during summer holidays.
2002-2003 Visiting Research Fellow in Hebrew University of Jerusalum, Israel.
1994 PhD in Forest Pathology, Northeast Forestry University, P. R. China.
1991 MS in Forest Pathology, Northeast Forestry University, P. R. China.
1988 Bachelar in Forest Protection, Northeast Forestry University, P. R. China.
Research Interesting
Global regulatory network and signal transduction in bacteria;
Molecular plant-microbe interactions;
Biocontrol agents of plant diseases and their mode of action;
Cross-kingdom signal transduction between bacteria and host plants.
Working Experience
2006-Present: Professor, Institute of Life sciences, Jiangsu University, China.
2002-2006: Professor, Department of Plant Pathology, Shandong Agricultural University.
2000-2001: Associated Professor, Department of Plant Pathology, Shandong Agri. Univ.
1996-2000: Associated Professor, Forest College, Agricultural University of Hebei.
1994-1996: Lecturer, Forest College of Hebei, China.
Contacts
E-mail: xgliu66@yahoo.com
Tel: 0086-511-88791702
Fax: 0086-511-88791923
6. Prof. Yongzhong Hou, PhD, MS Supervisor
Education Background
2002-2005, PhD of Cardiovascular pharmacology, Tianjin University, P.R. China.
1998-2000, MS of Biochemistry and Molecular Biology,Guizhou University, P.R. China.
1994-1998, BS of Biology,Sanxia College, P.R. China.
Research Interesting
Ubiquitin-proteasome sytem and cancer
The ubiquitin-proteasome system functions in a wide variety of cellular processes, including DNA replication, DNA repair, transcription, protein synthesis, cell differentiation and apoptosis. Ubiquitination is carried out by an enzymatic cascade composed of the E1 ubiquitin-activating enzyme, the E2 ubiquitin-conjugating enzyme and the E3 ubiquitin-protein ligase. Lots of studies show that Lys-63-linked chains is associated with signal transduction, membrane-protein trafficking, endocytosis and DNA repair, in contrast, K6, K11, K27, K29, K33, K48, linked ubiquitin chains target proteins for proteasome-mediated degradation. At present, we focus three areas as follows:
1.The functional mechanism of PPARγ E3 ubiquitin ligase
2.The molecular mechanism of PPARs (PPARα, PPARγ, PPARδ) regulates tumorigenesis.
3. Synthesis and scan novel PPARs ligands to treat diseases.
Working Experience
2012-present, Professor. University of Jiangshu.
2007.11-2012.7, Postdoctoral fellow. University of Calgary, Canada.
2006.4 -2007.11, Postdoctoral fellow. Kinki University department of physiology. Japan.
2005.6-2006.2, Postdoctoral fellow. University of Florida department of medicine, USA.
Contacts
Tel: 18261977604
Email:houyz@ujs.edu.cn
7. Dr. Prof. Hongyin Zhang
Master and PhD Supervisor
Education Background
2008 Visiting Scholar in The University of Queensland, Australia,
2004 PhD of Food Microbiology, Zhejiang University, P. R. China.
2001 MS of Food Biochemistry, Henan University of Technology (Pre Zhengzhou Grain College), P. R. China.
1995 BS of Food Science and Technology, Huazhong Agricultural University, P. R. China.
Research Interesting
Food Microbiology
Biological Control of Postharvest Diseases of Fruits and Vegetables
Postharvest Physiology and Pathology of Fruits and Vegetables
Contacts
Tel.: 13812451167Fax.: 051188780201
Email: zhanghongyin@ujs.edu.cn
8. Prof. Zhigang Tu
PhD Supervisor
Education Background
2004.08-2008.10,Ph.D.in Chemical Biology & Biomedical Engineering Department, Stevens Institute of Technology, NJ, U.S.A.
2001.09-2004.06,M.S in School of Life Sciences, Nanjing University, Nanjing,P.R. China.
1997.09-2001.06,B.S .in School of Life Science and Technology, China Pharmaceutical University, Nanjing, P.R.China.
Research Interesting
1.To investigate function of BRG1 in oncogene-induced premature senescence.
2.Studied the effects of the oncogenic Ras on BRCA-1 protein and their biological consequence.
3.Designed three series of lytic peptides with high anti-cancer selectivities.
Working Experience
2013.10-Present Professor in Institute of Life Sciences, Jiangsu University.
2012.04-2013.10, Associate staff scientist in the Wistar Institute.
2008.11-2012.03, Postdoctoral fellow in Fox Chase Cancer Center.
Contacts
E-Mail:zhigangtu@ujs.edu.cn
9. Dr.Associate Prof.Yong Wang
Master Supervisor
Education Background
2008 Ph.D. in Processing & Storage of Agricultural Products, Jiangsu University, P. R. China.
1985 B.Sc in Plant Physiology, Fudan University, Shanghai, P. R. China.
Research Interesting
Identification, classification and molecular evolutionary analysis of basic helix-loop-helix transcription factors in various organisms
Contacts
E-mail: ywang@ujs.edu.cn
Phone: 86-511-13861392095
Mailing address: School of Food and Biological Engineering, Jiangsu University
No. 301 Xuefu Road, Zhenjiang, Jiangsu 212013,P. R. China
10. Prof. Xiaoli Tan, PhD, MS Supervisor
Education Background
1998-2004, MS and PhD of Institute of Genetics and Developmental Biology Chinese Academy of Sciences ,Northwest A&F University,P. R. China.
1986-1990, B.S.of Agronomy Northwest A&F UniversityP. R. China.
Working Experience
2004-present, Institute of Life Sciences, Jiangsu University.
2009-2010, visiting scholar at Professor Ian A Graham’s lab in CNAP, Department of Biology, University of York, UK.
1990-1998, Research Assistant,Hybrid Rapeseed Research Center of Shanxi Province.
Research Interesting
Understanding the mechanism of fatty acids and lipids synthesis and regulation to promote the lipid contents in oil plant. Fatty acyl CoAs are the substrates for fatty acids and triacylglycerol (TAG), long chain fatty acyl CoA synthetase (LACS) catalyses the formation of the fatty acyl CoA. I am interested in characterization the function of LACSs in oil plant.
Plant based bioreactor development. We are developing high performance plant bioreactor to produce vaccines and assemble the multi-pathway to producepharmaceutical andindustrial important products.
Contacts
Tel.: 0086-13921587369
Email: xltan@ujs.edu.cn
11. Associate Prof. Huayou Chen, PhD, MS Supervisor
Education Background
2009.07-Present, Postdoctoral of Agricultural Engineering in Jiangsu University, P. R. China.
2003.09-2006.07, PhD ofMolecular MicrobiologyinShanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS), P. R. China.
2000.09-2003.07, M.S.of Biochemistry and Molecular Biology in East China Normal University P. R. China.
Working Experience
2011.2007-Present Assistant and Associate Professor in JiangsuUniversity
2006.2007-2011.2007 Research director in Shanghai Manrun Bio. Co., Ltd.
2007.2006-2006.2007 Researcher in Shanghai celstar Bio. Co., Ltd.
2006.2003-2009.2003 Microbiology researcher in Shanghai Siji Bio. Co., Ltd.
Research Interesting
Bio-feed and genetic engineering; Enzyme engineering; Microbe metabolic engineering; Fermentation engineering; biochemical engineering.
Contacts
Tel.: +86-13912800258
Email: phdc@163.com
12. Associate Prof. Xiaoyong Liu, PhD, MS Supervisor
Education Background
2009 PhD in Insect molecular biology, Jiangsu University, P. R. China.
2001 MS in Animal physiology, Nanchang University, P. R. China.
1998 College Degree in Biology, Nanchang University, P. R. China.
Research Interesting
The interaction between insects and viruses, proteomics.
Contacts
Tel.: +86-511-88791702
Email:liuxiaoyong@ujs.edu.cn
13. Associate Prof. Guoping Huang, PhD, MS Supervisor
Education Background
2004 PhD in Zhejiang University, Hangzhou, Zhejiang, P. R. China.
2001 MS in Nanchang University, Nanchang, Jiangxi, P. R. China.
1994 Diploma in Fuzhuo Teachers Training College, Fuzhou, Jiangxi, P. R. China.
Research Interesting
Silk fibroin carrier for controlled drug release
Contacts
Tel.: +86-511-88791702
Email: Huanggp@ujs.edu.cn; hgp126126@yahoo.com.cn
14. Associate Prof. Jian Lu, PhD, MS Supervisor
Education Background
2011.2-2013.2 Postdoctoral Scholar, University of Kentucky, USA
2006.9-2009.12 PhD of Food Science, Jiangsu UniversityP R.China.
2004.9-2007.6 MS of Biochemistry and Molecular Biology, Jiangsu University,P R.China.
1997.9-2001.6 BS in Biopharmaceutical Engineering, Nanjing University & China Pharmaceutical University, P.R.China.
Working Experience
2012- Present Research Associate , Institute of Life Sciences, Jiangsu University
2011.2-2013.2 Reaseach assistant,University of Kentucky,USA
2006- 2012 Assistant professor, Institute of Life Sciences, Jiangsu University
2001-2006 Teaching assistant, Institute of Life Sciences, JiangsuUniversity
2006-2012 assistant professor, Institute of Life Sciences, JiangsuUniversity
Research Interesting
Reveal the effects of environmental toxin on physiology, biochemistry, metabolism, development and genetics of human and animals and related biological mechanisms;
Prevention of cancers induced by environmental toxin, including heavy metals and all kinds of chemicals;
Anticancer mechanism of natural compounds from dietary foods or traditional Chinese medicine.
Contacts
Tel:086-511-85878748
Email:lujian@ujs.edu.cn
15. Associate Prof. Zhongjian Guo, PhD, MS Supervisor
Education Background
2011 Postdoc, Louisiana State University, USA.
2005 PhD in Agricultural Insect and Pest Management, Zhejiang University, Hangzhou, P.R.China.
2002 MS in Agricultural Insect and Pest Management, Henan University of Technology, Zhengzhou, P.R.China.
1999 College Degree in Agricultural Insect and Pest Management, Henan University of Technology, Zhengzhou, P.R.China.
Working experience
2005-Present Institute of Life Sciences, Jiangsu University, P.R. China.
2011-2012 School of Veterinary Medicine, Louisiana State University, USA.
Research Interesting
Heat shock response of silkworm to infection ofBombyx morinucleopolyhedrovirus;
Role of silkworm ubiquitin-proteosome system on propagation ofBombyx mori;nucleopolyhedrovirus.
Contacts
Tel.: +86-13951287662
Email:gzh762677@ujs.edu.cn
16. Associate Prof. Qinggang Xu, PhD, MS Supervisor
Education Background
2006-2009 PhD of Genetics, Zhejiang University, P.R.China.
1999-2002 MS of Entomology, Northwest A&F University,P.R.China.
1991-1995 BS of Plant Protection, Northwest Agricultural University, P.R.China.
Research Interesting
Cellulose hydrolytic enzymes in wood-feeding termites and microorganisms;
Intestinal symbiotic microorganisms of insects and their applications.
Contacts
E-mail: xuqg@ujs.edu.cn
Tel: +86-511-88791702
17. Research Assistant Weijun Mai, PhD, MS Supervisor
Education Background
2005 PhD, South China Sea Institute of Oceanology, CAS.
2001 MS, South China Institute of Botany,P.R.China.
1997 BS, Guangzhou University,P.R.China.
Working experience
2010-Present Research Assistant in Institute of Life Sciences, Jiangsu University.
2008-2010 Postdoctor, School Of Life Science, South China Normal University.
Research Interesting
Molecular immunity of the commercial marine species;
Functional studies on immune genes of aquatic animal;
Cell damage and repair and their functional regulation in mammalian cells and model organisms.
Contacts
E-mail:mwj9876@yahoo.com.cn
Tel: 86-511-88791702
18. Associate Prof. Li Gao, PhD, MS Supervisor
Education Background
2010 PhD of Biomedical Engineering, Southeast University, Nanjing,P.R.China.
2004 MS of Plant Genetic Breeding, Anhui Agricultural Universtiy,Hefei, P.R.China.
2001 BS of Biology, Jiangsu Normal Univeristy, Xuzhou, P.R.China.
Research Interesting
DNA sequencing on a microarray;
Label-free detection based on biosensor.
Contacts
Email: gaoli@ujs.edu.cn
Tel.: +86-511-88791702
19. Research Assistant Guohui Li, PhD, MS Supervisor
Education Background
2008 PhD in SUN YAT-SEN University, Guangzhou, Guangdong, P. R. China.
2005 MS in JiNan University, Guangzhou, Guangdong, P. R. China,
1997 Diploma in GuangZhou University, Guangzhou, Guangdong, P. R. China.
Research Interesting
Molecular mechanism of interaction between insect virus and host;
Gene expression regulation.
Contacts
E-mailliguohuijnl@yahoo.com.cn
Tel: 0511-88791702, 15052931327
20. Research Assistant Zheng Wang,PhD,MS Supervisor
Education Background
2009 PhD of Biochemistry and Molecular Biology, The Chinese Academy of Agricultural Sciences ,P. R. China.
2005 MS of College of Agriculture, Inner Mongolia Agricultural University, P. R. China.
Research Interesting
The interaction between plant and pathogen;
Plant Functional Genomics.
Contacts
E-mailWangzheng4466@163.com
Tel: 0511-88791702
21. Research Assistant Huiqing Chen, PhD, MS Supervisor
Education Background
2008 PhD in Life science, Jiangsu University, P. R. China.
2005 MS in Life science, Zhongshan University, P. R. China
1998 College Degree in Life science, South China Normal University, P. R. China.
Working experience
2008-Present Research Assistant in Institute of Life Sciences, Jiangsu University.
Contacts
Email: sw98318@21cn.com
Tel.: +86-511-88791923
22. Research Assistant. Keming Zhu, PhD, MS Supervisor
Education Background
2009 PhD inYangzhou University, Yangzhou, P.R. China.
2006 MS in Yangzhou University, Yangzhou, P.R. China.
2003,BS in Yangzhou University, Yangzhou, P.R. China.
Research Interesting
The cloning and functional analysis of important genes in Rice.
Contacts
E-mail: uegzkg@ujs.edu.cn
23. Research Assistant Jun Cao, PhD, MS Supervisor
Education Background
2009 PhD of Genetics, College of Life Science, Zhejiang University, P. R. China, .
2003 MS of Biochemistry and Molecular Biology, College of Life Science, ShandongAgricultural University, P. R. China,.
2000 Bachelor’s Degree in Silkworm, College of Forestry, Shandong Agricultural University, P. R. China.
Research Interesting
DNA specific genetic structure, evolution and function;
Molecular genetics and compensatory evolution;
Gene expression regulation.
Contacts
Tel.: +86-511-88791702
Email:cjinfor@163.com
24. Research Assistant Zhaoyang Hu, PhD, MS Supervisor
Education Background
2009-2010 State Key Laboratory of Bioconctrol, Sun Yat-Sen University.
2005-2009 PhD in School of Life Science, Sun Yat-Sen University.
2002-2005 MS in School of Life Science and Technology, Guangxi university,P.R.China.
Working experience
2010-present,Research Assistant in Institute of Life Sciences, Jiangsu University.
Research Interesting
Molecular biology of insect virus;
Study the interaction between the insect viruses and its hosts.
Contacts
Email:sunnyhu163@163.com
Tel.: +86-511-88791702
25. Associate Professor, Hengchuan Xia, PhD, MS Supervisor
Education Background
1993-1997, Qu Fu Normal University, General Biology, B.Sc.
1997-2004, Shanghai Institute of Biochemistry and Cellular Biology, Chinese Academy of Science, Biochemistry and Molecular Biology, Ph.D.
Working experience
2004-2008, University of Michigan, U.S., Structural Biology, Cellular Biology, Visiting Scholar
2008-present,Life Sciences Institute, Jiangsu University, China
Research Interesting
Molecular biology of Insects, Interactions between insect viruses and hosts, Structural and functional studies of proteins.
Contacts
Email: hchxia@mail.ujs.edu.cn
Tel.: +86-511-88791702
26. Research Assistant Qiang Wang, PhD, MS Supervisor
Education Background
2005-2008, Jiangsu University, B.Sc.
2008-2013, Kazawa University, Japan, Ph.D.
Working experience
2008-Present Research Assistant in Institute of Life Sciences, Jiangsu University.
Contacts
Email: wangqiang@ujs.edu.cn
Tel.: +86-511-88791923
27. Associate Prof. Yang Zhou, PhD, MS Supervisor
Education Background
2010 PhD in Life science, Jiangsu University, P. R. China
2004 MS of Plant Genetic Breeding, Anhui Agricultural Universtiy, Hefei, P.R.China.
2001 BS of Biology, Nanjing Normal Univeristy, Nanjing, P.R.China.
Working experience
2010-Present Research Assistant in Institute of Life Sciences, Jiangsu University
Research Interesting
1. Molecular mechanism of interaction between insect virus and host
2. Biological toxicity of heavy metal such as iron, copper and cadmium
Contacts
Email: zhouyang@ujs.edu.cn
Tel.: +86-511-88791702
28.Associate Prof.GU Jie MS Supervisor NAME .
Gender: Male Degree: Doctor
Education Background
2011/07-2014/06, Hong Kong Baptist University, Biology, Doctor
2009/03-2011/02, Hong Kong Baptist University, Biology, Master
2005/09-2008/06, Yangzhou University, Biochemistry and Molecular Biology, Master
2001/09-2005/06, Yangzhou University, Biological Science and Technology, Bachelor
Working Experience
2017/09 - Present, Jiangsu University, Institute of life Sciences, associate professor
2015/06-2016/08, Jiangsu University, Institute of life Sciences, assistant professor
2014/07-2015/06, Hong Kong Baptist University, Department of Biology, Senior Research assistant
Research Interesting
Molecular toxicology mechanism of heavy metals
Calcium homeostasis related diseases
Environmental pollution associated clinical diseases
Contacts
Email: 1000004531@ujs.edu.cn Tell: 13405583078,
29. Assistant Lipeng Qiu, Ph.D., MS Supervisor
Education Background
2007.09-2011.07, Ph.D. in Biochemistry and molecular biology, Key Laboratory of Pathogenic Microbiology and Immunology (PMI), Institute of Microbiology, Chinese Academy of Sciences (IMCAS), China
2001.09-2004.07, M.S. in Microbial and Biochemical Pharmacy, Shenyang Pharmaceutical University (SPU), China
1997.09-2001.07, B.Eng. in Microbial pharmaceutics, SPU, China
Working Experience
2013.12-2016.09 Postdoctoral fellow at Johns Hopkins University School of Medicine, U.S.A.
2011.09-2016.06 Postdoctoral fellow at Jiangsu University, China
2011.07-Present Research Assistant at Jiangsu University, China
2004.07-2007.07 Assistant Lecturer at Changzhou University, China
Research Interests
The function and regulatory mechanism of non-coding RNA in different diseases; hepatitis B; allergic asthma
Contacts
Tel.: +86-511-88791702
E-mail address: qiulp@mail.ujs.edu.cn
30. Assistant Prof. Qi Tang, PhD, MS Supervisor
Education Background
2013 PhD in Life science, Jiangsu University, P. R. China.
2005 MS in JiNan University, Guangzhou, Guangdong, P. R. China.
2002 College Degree in Life science, South China Normal University, P. R. China.
Working experience
2013-present,Research Assistant in Institute of Life Sciences, Jiangsu University.
Research Interesting
Molecular biology of insect virus;
Study the interaction between the insect viruses and its hosts.
Contacts
Email:tangqi1224@163.com
Tel.: +86-511-88791702
31. Associate Prof. Qian Yu, PhD, MS Supervisor
Education Background
2010-2015. PhD in INRS-Institut Armand-Frappier, University of Quebec,Laval, Quebec, Virology and Immunology
2007-2010. M.S. in Central China Normal University, Wuhan, China, Microbiology,
2002-2006. B.Sc in Central China Normal University, Wuhan, China Biotechnology,
Research Interesting
Genome organization and transcription strategies of insect viruses
Evolution of insect viruses
Discovery of new viruses
Contacts
E-mail: qianyu@ujs.edu.cn
Tel: (+86)15050853270
32. Research Assistant Feng Yu, PhD, MS Supervisor
Education Background
2012-2015 Postdoc, Baylor college of Medicine, USA.
2010 PhD in Life science, Jiangsu University, P. R. China.
2003 MS in College of Veterinary Medicine, Yangzhou University, P. R. China
2000 Bachelor’s Degree in Huazhong Agricultural University, P. R. China.
Working experience
2003-Present Research Assistant in Institute of Life Sciences, Jiangsu University
Research Interesting
Cancer immunotherapy: Oncolytic virus therapy and CAR-T cell
33. Assistant Prof. Lina Ding, PhD, MS Supervisor
Education Background
2011 PhD in Nanjing Agricultural University, P. R. China.
2006 MS in Nanjing Agricultural University, P. R. China
2004 Bachelor’s Degree in Shandong Agricultural University, P. R. China.
Working experience
2011-Present Assistant Prof. in Institute of Life Sciences, Jiangsu University.
Research Interesting
The mechanism of plant-pathogen interactions
Signal transduction pathway and proteomics
Contacts
Email: lnding6@126.com
Tel.: +86-511-88791923
34. Peng Lü, Ms Supervisor
Education Background
2011.09-2014.06 PhD in Jiangsu University, P. R. China.
2006.09-2009.06 Ms in Jiangsu University, P. R. China
2002.09-2006.06 Bachelor in Jiangsu University, P. R. China.
Working Experience
2014.12-Present Assistant Professor in Insititute of Life Scicences, Jiangsu Universtiy .
2010.12-2011.08 Marketing Specialist in Seajet Scientific Ltd.
2009.06-2010.12 Research Asistant in Institut Pasteur of Shanghai Chinese Academy of Sciences
Research Interesting
Interaction between insect viruses and their host;
Panning and application of humanized engineered antibody
Contacts
E-mail: penglu@ujs.edu.cn
Tel: 0511-88791702
Fax: 0511-88791923
35. Associate professor Yanhua Yang, PhD, Master Supervisor
Education Background
2004.9-2008.7 Ph.D. in molecular biology and moleculalr evolution
(Supervisor: Prof. Song Ge) State Key Laboratory of Systematic and Evolutionary Botany, Institute ofBotany, Chinese Academy of Sciences, Beijing, China
2000.9-2003.6 M.S. in botany
(Supervisor: Prof. Guoxiang Chen) Institute of Life Sciences, Nanjing Normal University, Nanjing, China
Working Experience
2014/7-Present Associate Professor, Institute of Life Sciences, Jiangsu University
2010/7-2014/7 Assistant Professor, Institute of Life Sciences, Jiangsu University
2008/8-2010/7 Assistant Professor, Institute of Food Crops, Jiangsu Academy of Agricultural Sciences
Research interests
Functional genomics and proteomics of model organism, Molecular systematics and molecular evolution
Contacts
Institute of Life Sciences, Jiangsu University, Zhenjiang, Jiangsu Province, China
Tel:86-(0)15262918732
Email:yanhuayang@126.com
36. Associate Prof. Feifei Zhu, PhD, MS Supervisor
Education Background
2009-2014. PhD in Analytical Chemistry, Department of Chemistry, Indiana University, USA
2005-2009. B.Sc in School of Chemistry and Chemical Engineering, Nanjing University, China
Research Interesting
Glycomic, proteomic, and glycoproteomic analysis and functional studies using different animal models
Contacts
E-mail: feifzhu@ujs.edu.cn
Tel: (+86)18705296369